chr17:32,120,048–32,120,809

chr17 : 32,120,048 – 32,120,809

761 bp 65 TFs 8 linked genes

This 761 bp open chromatin element is linked to 8 target genes and is bound by 65 transcription factors.

Linked Genes

8 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000277511		6.8 kb	Proximal	Proximity
RHOT1		22.1 kb	Distal	Multiome
LRRC37B		113.1 kb	Distal	Multiome
SUZ12		183.4 kb	Distal	Multiome
UTP6		218.7 kb	Distal	Multiome
C17orf75		221.7 kb	Distal	Multiome
ZNF207		229.7 kb	Distal	Multiome
COPRS		261.2 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

65 transcription factors

ChIP LNCaP GSE80256.AR.LNCaP 342 bp overlap

ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 286 bp overlap

ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 383 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 210 bp overlap

ASCL1 1 dataset

ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 206 bp overlap

ChIP HUES-64 GSE104059.BRD1.HUES-64 603 bp overlap

ChIP MV4-11_IBET151_5000nM GSE120715.BRD3.MV4-11_IBET151_5000nM 164 bp overlap

BRD4 3 datasets

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 475 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 191 bp overlap

ChIP KB GSE52469.CDK6.KB 110 bp overlap

ChIP U2OS GSE44236.CRY1.U2OS 201 bp overlap

ChIP GM12866 ENCSR000DRF.CTCF.GM12866 60 bp overlap

Cebpa 4 datasets

ChIP BLaER1 ENCFF335XTP 251 bp overlap

ChIP BLaER1 ENCFF335XTP 88 bp overlap

ChIP BLaER1 ENCFF364PUR 84 bp overlap

ChIP BLaER1 ENCFF896HSY 340 bp overlap

Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap

ChIP K562 ENCFF511ZZZ 423 bp overlap

ESR1 2 datasets

ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 106 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 323 bp overlap

EZH2 2 datasets

ChIP ProEs GSE59087.EZH2.ProEs 107 bp overlap

ChIP T98G GSE112240.EZH2.T98G 207 bp overlap

Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 342 bp overlap

ChIP DE DE-FOXA2-2 693 bp overlap

Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_48h DE_48h-FOXA3_MA1683.2 7 bp overlap

FOXF2 1 dataset

Motif DE_48h DE_48h-FOXF2_MA0030.2 9 bp overlap

FOXI1 1 dataset

Motif DE_48h DE_48h-FOXI1_MA0042.2 7 bp overlap

FOXP1 1 dataset

Motif DE_48h DE_48h-FOXP1_MA0481.4 7 bp overlap

FOXP4 1 dataset

Motif DE_48h DE_48h-FOXP4_MA2117.1 7 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 341 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 304 bp overlap

ChIP DE DE-GATA6-2 559 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 376 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 286 bp overlap

GRHL1 1 dataset

Motif DE_48h DE_48h-GRHL1_MA0647.2 10 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 179 bp overlap

HMBOX1 3 datasets

ChIP K-562 ENCSR757IIU.HMBOX1.K-562 180 bp overlap

ChIP K562 ENCFF055GAZ 432 bp overlap

ChIP K562 ENCFF317JJX 427 bp overlap

ChIP GP5D GSE51234.KLF5.GP5D 307 bp overlap

ChIP islet ERP004003.MAFB.islet 305 bp overlap

ChIP K-562 ENCSR818DQV.MAFG.K-562 314 bp overlap

ChIP A549 ENCFF371EPR 377 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 55 bp overlap

MED1 2 datasets

ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 272 bp overlap

ChIP VCaP GSE148358.MED1.VCaP 355 bp overlap

MEIS2 1 dataset

ChIP K-562 ENCSR851BNE.MEIS2.K-562 235 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 158 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 175 bp overlap

NIPBL 1 dataset

ChIP GP5D GSE51234.NIPBL.GP5D 287 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 384 bp overlap

NR5A2 1 dataset

ChIP A-549 ENCSR190GIW.NR5A2.A-549 241 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 290 bp overlap

ChIP islet ERP001456.PDX1.islet 127 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 162 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 346 bp overlap

RFX1 4 datasets

ChIP K-562 ENCSR968GIB.RFX1.K-562 467 bp overlap

ChIP K-562 ENCSR041AXL.RFX1.K-562 410 bp overlap

ChIP K562 ENCFF421AVO 322 bp overlap

ChIP K562 ENCFF809XVG 181 bp overlap

SETDB1 1 dataset

ChIP WN8532 GSE36579.SETDB1.WN8532 171 bp overlap

ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 165 bp overlap

SMAD2 1 dataset

Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 622 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 664 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 485 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 315 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 521 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 469 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 718 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 570 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 455 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 723 bp overlap

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 224 bp overlap

STAT3 2 datasets

ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 141 bp overlap

ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 86 bp overlap

Tfcp2l1 1 dataset

Motif DE_48h DE_48h-Tfcp2l1_MA0145.2 14 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 117 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 265 bp overlap

ZFP64 1 dataset

ChIP HEK293 GSE76494.ZFP64.HEK293 159 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 248 bp overlap

ZNF257 1 dataset

ChIP HEK293T GSE78099.ZNF257.HEK293T 93 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 192 bp overlap

ZNF316 1 dataset

ChIP K562 ENCFF838QCD 417 bp overlap

ZNF449 1 dataset

ChIP HEK293 ENCFF764ZIC 120 bp overlap

ZNF766 1 dataset

Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap

ZNF768 1 dataset

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

ZSCAN22 1 dataset

ChIP HEK293 GSE76494.ZSCAN22.HEK293 217 bp overlap