chr15 : 67,152,836 67,153,778
942 bp 90 TFs 3 linked genes
This 942 bp open chromatin element is linked to SMAD3, AAGAB, and IQCH and is bound by 90 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SMAD3 87.7 kb Distal Multiome
AAGAB 101.4 kb Distal Multiome
IQCH 101.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:67,147,836 – 67,158,778
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 325 bp overlap
ARID1A 3 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 227 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 270 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 309 bp overlap
ASCL1 2 datasets
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 286 bp overlap
ATF2 1 dataset
Motif DE_72h DE_72h-ATF2_MA1632.2 10 bp overlap
Arid5a 1 dataset
Motif DE_72h DE_72h-Arid5a_MA0602.2 8 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 330 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 190 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 247 bp overlap
CEBPA 1 dataset
Motif DE_72h DE_72h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_72h DE_72h-CEBPD_MA0836.3 8 bp overlap
CREB1 1 dataset
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF364PUR 380 bp overlap
ChIP BLaER1 ENCFF460KDD 235 bp overlap
ChIP BLaER1 ENCFF508JZF 441 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
EP300 1 dataset
ChIP 697 GSE138031.EP300.697 215 bp overlap
FEZF2 2 datasets
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 3 datasets
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 942 bp overlap
ChIP DE DE-FOXA2-2 942 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 529 bp overlap
ChIP DE DE-GATA4-1 258 bp overlap
ChIP DE DE-GATA4-2 942 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 247 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 425 bp overlap
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 541 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 436 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
IKZF1 2 datasets
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 169 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 248 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 267 bp overlap
JUN 4 datasets
ChIP A549 ENCFF846DUV 256 bp overlap
ChIP A549 ENCFF846DUV 595 bp overlap
ChIP A549 ENCFF846DUV 685 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 386 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 282 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 249 bp overlap
MED1 4 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 127 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 292 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 73 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 164 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap
NCAPH2 3 datasets
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 296 bp overlap
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 206 bp overlap
ChIP RMG-I GSE120058.NCAPH2.RMG-I 162 bp overlap
NFKB1 1 dataset
Motif DE_72h DE_72h-NFKB1_MA0105.4 13 bp overlap
NR2C1 1 dataset
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 447 bp overlap
Nr1H2 1 dataset
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
OSR1 1 dataset
Motif DE_72h DE_72h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_72h DE_72h-OSR2_MA1646.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 221 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 340 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 722 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 345 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 4 datasets
ChIP 697 GSE138031.RUNX1.697 238 bp overlap
ChIP 697 GSE138031.RUNX1.697 275 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 125 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 173 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 235 bp overlap
Rarg 1 dataset
Motif DE_72h DE_72h-Rarg_MA0860.1 17 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 517 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 289 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 320 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 254 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 240 bp overlap
SNAI1 1 dataset
Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 305 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 703 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 418 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0828.3 10 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 348 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
TCF12 1 dataset
Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
THRA 1 dataset
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
ZEB1 3 datasets
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF135 1 dataset
Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap
ZNF213 1 dataset
Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap
ZNF281 1 dataset
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_72h DE_72h-ZNF320_MA1976.2 20 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 453 bp overlap
ZNF770 1 dataset
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap