chr14 : 104,644,552 104,645,399
847 bp 73 TFs 5 linked genes
This 847 bp open chromatin element is linked to 5 target genes and is bound by 73 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
INF2 44.7 kb Distal Multiome
SIVA1 108.2 kb Distal Multiome
AKT1 150.8 kb Distal Multiome
CEP170B 220.4 kb Distal Multiome
KIF26A 506.3 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:104,639,552 – 104,650,399
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 1 dataset
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 137 bp overlap
BARX1 1 dataset
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 158 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 298 bp overlap
BSX 1 dataset
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif DE_24h DE_24h-Bcl11B_MA1989.2 9 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 63 bp overlap
CEBPA 1 dataset
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 187 bp overlap
CEBPB 1 dataset
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 132 bp overlap
Cebpa 6 datasets
ChIP BLaER1 ENCFF031ISE 142 bp overlap
ChIP BLaER1 ENCFF093OYK 224 bp overlap
ChIP BLaER1 ENCFF250ODG 424 bp overlap
ChIP BLaER1 ENCFF250ODG 210 bp overlap
ChIP BLaER1 ENCFF460KDD 239 bp overlap
ChIP BLaER1 ENCFF798NMV 415 bp overlap
DLX1 1 dataset
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 190 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 707 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 124 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 160 bp overlap
EZH2 2 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 109 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 587 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 404 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 269 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 730 bp overlap
ChIP DE DE-FOXA2-2 678 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 571 bp overlap
ChIP DE DE-GATA4-2 592 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 491 bp overlap
ChIP DE DE-GATA6-2 506 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 775 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 710 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 780 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 823 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 798 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 847 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 634 bp overlap
GBX2 1 dataset
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 210 bp overlap
Gfi1B 1 dataset
Motif DE_24h DE_24h-Gfi1B_MA0483.2 10 bp overlap
HESX1 1 dataset
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 178 bp overlap
HOXA7 1 dataset
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 724 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 507 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 739 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 746 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 306 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 754 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 147 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 73 bp overlap
LBX2 1 dataset
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MNT 1 dataset
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 95 bp overlap
MSX1 1 dataset
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 101 bp overlap
Msx3 1 dataset
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 149 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 518 bp overlap
Nobox 1 dataset
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 315 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 536 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 467 bp overlap
RAX 1 dataset
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RELA 4 datasets
ChIP SGBS GSE64233.RELA.SGBS 194 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 152 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 188 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 160 bp overlap
ChIP neural cell ENCFF882LXX 505 bp overlap
RUNX2 1 dataset
Motif DE_24h DE_24h-RUNX2_MA0511.2 9 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 212 bp overlap
Runx1 1 dataset
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 173 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 173 bp overlap
SMAD2 3 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 220 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 157 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 583 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 847 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 847 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 847 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 847 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 847 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 847 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 847 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 234 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 190 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 396 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 102 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 191 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 527 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 847 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 318 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 187 bp overlap
STAT3 1 dataset
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 84 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 317 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 256 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 345 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 226 bp overlap
ZFP90 1 dataset
ChIP HepG2 ENCFF409XXV 61 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 152 bp overlap
ZNF157 1 dataset
Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 321 bp overlap