chr14 : 74,349,652 74,350,519
867 bp 61 TFs 1 linked gene
This 867 bp open chromatin element is linked to VRTN and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
VRTN 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:74,344,652 – 74,355,519
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 445 bp overlap
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 117 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 384 bp overlap
BCOR 3 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 192 bp overlap
ChIP K562 ENCFF343XWA 235 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 182 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 254 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 599 bp overlap
BRD4 1 dataset
ChIP HT29 GSE73319.BRD4.HT29 232 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 114 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 141 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 651 bp overlap
ChIP H1 ENCFF998XEK 274 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 430 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 390 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 251 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
ESR1 2 datasets
ChIP T-47D GSE148277.ESR1.T-47D 264 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 316 bp overlap
EZH2 5 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 404 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 70 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 61 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 291 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 128 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 324 bp overlap
ChIP DE DE-FOXA2-1 54 bp overlap
ChIP DE DE-FOXA2-2 331 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 602 bp overlap
ChIP DE DE-GATA4-1 66 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
ChIP DE DE-GATA4-2 50 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 338 bp overlap
ChIP foregut GSE117136.GATA4.foregut 458 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 627 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 768 bp overlap
GATA6 24 datasets
ChIP AGS GSE51936.GATA6.AGS 156 bp overlap
ChIP AGS GSE51705.GATA6.AGS 302 bp overlap
ChIP AGS GSE51936.GATA6.AGS 130 bp overlap
ChIP DE DE-GATA6-1 489 bp overlap
ChIP DE DE-GATA6-1 110 bp overlap
ChIP DE DE-GATA6-2 613 bp overlap
ChIP DE DE-GATA6-2 119 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 67 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 66 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 92 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 344 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 57 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 92 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 170 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 513 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 190 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 373 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 237 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 442 bp overlap
ChIP foregut GSE117136.GATA6.foregut 466 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 278 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 534 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 762 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 159 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 144 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 175 bp overlap
HNF4A 9 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 333 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 289 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 502 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 164 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 211 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 556 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 144 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 600 bp overlap
ChIP hiPSC GSE104613.HNF4A.hiPSC 380 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 269 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 283 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 335 bp overlap
KDM1A 6 datasets
ChIP H1 ENCFF696SGD 197 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 112 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 109 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 398 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 164 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 325 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 394 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 149 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 230 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 150 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 150 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 133 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 390 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 293 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 350 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 491 bp overlap
ChIP stomach ENCFF820WZN 143 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 126 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 104 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 155 bp overlap
ChIP K562 ENCFF248CGR 198 bp overlap
ChIP K562 ENCFF957ORK 198 bp overlap
REST 2 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 380 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 92 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 198 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 540 bp overlap
SIN3A 6 datasets
ChIP H1 ENCFF042ZSL 486 bp overlap
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP H1 ENCFF896IJG 298 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 301 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 124 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 141 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 572 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 131 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 195 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 246 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 236 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 151 bp overlap
SPI1 4 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 292 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 315 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 294 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 288 bp overlap
STAT3 4 datasets
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 259 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 325 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 422 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 183 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 849 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 197 bp overlap
TAL1 7 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 249 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 177 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 158 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 155 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 207 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 183 bp overlap
ChIP K562 ENCFF661CCK 263 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 157 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 151 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 219 bp overlap
ChIP K562 ENCFF319QZT 354 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 228 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 226 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 109 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 163 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 119 bp overlap
ChIP K562 ENCFF361LXT 204 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 171 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 196 bp overlap
ZNF24 3 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 300 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 372 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 258 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 253 bp overlap