chr1 : 224,786,739 224,787,253
514 bp 83 TFs 0 linked genes
This 514 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:224,781,739 – 224,792,253
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ARID3A 2 datasets
ChIP GM12878 ENCFF006WWZ 255 bp overlap
ChIP GM12878 ENCSR778UBR.ARID3A.GM12878 218 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 179 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 277 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 112 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 111 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 474 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 262 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF364PUR 342 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 235 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 294 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 242 bp overlap
FOSL2 3 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 190 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 155 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 224 bp overlap
FOXA1 2 datasets
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 164 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 239 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 503 bp overlap
ChIP DE DE-FOXA2-2 487 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 133 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 371 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 460 bp overlap
ChIP DE DE-GATA4-2 491 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 475 bp overlap
ChIP DE DE-GATA6-2 416 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 470 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 360 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCFF264FBS 325 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 167 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 388 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 133 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 514 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 263 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 381 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 236 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 178 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 248 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 268 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 397 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 234 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 367 bp overlap
JUND 2 datasets
ChIP GM12878 ENCSR000EYV.JUND.GM12878 126 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 138 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 198 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 401 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 409 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 236 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 177 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 245 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 199 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 374 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 127 bp overlap
OSR2 2 datasets
ChIP HEK293 GSE76494.OSR2.HEK293 209 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 314 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCFF482PUW 157 bp overlap
PBX3 2 datasets
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
ChIP SK-N-SH ENCFF876BMC 210 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 226 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 276 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 198 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 414 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 225 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 194 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 325 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 159 bp overlap
ChIP HEK293 ENCFF711QQB 450 bp overlap
SETDB1 4 datasets
ChIP HEK293 ENCFF676PLV 424 bp overlap
ChIP HEK293 ENCFF676PLV 216 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 427 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 413 bp overlap
SKI 1 dataset
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 248 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 323 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 317 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 172 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 392 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 292 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 345 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 495 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 442 bp overlap
SMAD3 3 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 357 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 335 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 248 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 106 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 420 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 186 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 327 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 181 bp overlap
ChIP fibroblast_L169A GSE139053.SS18-SSX.fibroblast_L169A 252 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 83 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 232 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 380 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 334 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 494 bp overlap
ChIP HEK293 ENCFF582MWI 273 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 351 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 401 bp overlap
ZBTB21 3 datasets
ChIP HEK293 ENCFF509WYZ 401 bp overlap
ChIP HEK293 ENCFF509WYZ 177 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 268 bp overlap
ZFP3 1 dataset
ChIP HEK293 ENCFF345CRU 325 bp overlap
ZFP36 2 datasets
ChIP GM12878 ENCFF234WRG 234 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 188 bp overlap
ZFP37 2 datasets
ChIP HEK293 ENCFF968PWB 491 bp overlap
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 259 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 431 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 202 bp overlap
ChIP HEK293 ENCFF066NGR 136 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 337 bp overlap
ZNF24 3 datasets
ChIP HEK293 ENCFF308WOW 431 bp overlap
ChIP HEK293 ENCFF308WOW 262 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 336 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 514 bp overlap
ChIP HEK293 ENCFF784SLD 395 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 324 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 166 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 353 bp overlap
ZNF510 1 dataset
ChIP HEK293 ENCFF202BSY 238 bp overlap
ZNF518A 1 dataset
ChIP HEK293 ENCFF892ULS 329 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 253 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 395 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 370 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 430 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 352 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 392 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 287 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 221 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 178 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 219 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 401 bp overlap