chr13 : 103,066,661 – 103,067,197
536 bp 118 TFs 0 linked genes
This 536 bp open chromatin element has no linked target genes and is bound by 118 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:103,061,661 – 103,072,197
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
118 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
ARGFX 2 datasets
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 356 bp overlap
Ar 1 dataset
Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 216 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 186 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 374 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 510 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 232 bp overlap
ChIP MCF-7 ENCFF570JPP 231 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 245 bp overlap
DMRT3 1 dataset
Motif DE_12h DE_12h-DMRT3_MA0610.2 7 bp overlap
DMRTC2 2 datasets
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
DRGX 2 datasets
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
EMX1 2 datasets
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
EN2 2 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 125 bp overlap
ChIP neural cell ENCFF442QNK 246 bp overlap
ESX1 2 datasets
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
Motif ES_0h ES_0h-ESX1_MA0644.3 7 bp overlap
EVX1 2 datasets
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GBX1 2 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GSX1 2 datasets
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 50 bp overlap
HOXA1 2 datasets
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA2 2 datasets
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXB1 2 datasets
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXC8 2 datasets
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
ISX 2 datasets
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LBX1 2 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LHX5 2 datasets
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
Motif ES_0h ES_0h-LHX6_MA0658.2 8 bp overlap
LHX9 2 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
LMX1A 2 datasets
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
Motif ES_0h ES_0h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Motif ES_0h ES_0h-LMX1B_MA0703.3 8 bp overlap
Lhx4 2 datasets
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEOX1 2 datasets
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 134 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 536 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 197 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 120 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 440 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 526 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 260 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 51 bp overlap
NKX2-2 2 datasets
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap
NKX6-2 2 datasets
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
Motif ES_0h ES_0h-NOTO_MA0710.2 7 bp overlap
NR3C1 2 datasets
Motif DE_12h DE_12h-NR3C1_MA0113.4 15 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 90 bp overlap
NR3C2 1 dataset
Motif DE_12h DE_12h-NR3C2_MA0727.2 15 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PDX1 2 datasets
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 519 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 441 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 536 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 160 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 288 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 173 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
POU6F2 2 datasets
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
PRRX1 2 datasets
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
PRRX2 2 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Pou5f1::Sox2 4 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 328 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 536 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 536 bp overlap
RAX2 2 datasets
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 233 bp overlap
ChIP neural cell ENCFF882LXX 322 bp overlap
RFX1 8 datasets
ChIP HepG2 ENCFF144SCF 263 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 234 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 200 bp overlap
ChIP K562 ENCFF421AVO 184 bp overlap
ChIP MCF-7 ENCFF782EZS 246 bp overlap
ChIP MCF-7 ENCFF973QAD 139 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 233 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 223 bp overlap
SHOX 2 datasets
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
SIX2 2 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 322 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 293 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 517 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 171 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 496 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 376 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 229 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 464 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 536 bp overlap
ChIP hESC GSE18292.SOX2.hESC 197 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 362 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0829.3 10 bp overlap
Shox2 2 datasets
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TBX1 2 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
Motif ES_0h ES_0h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
Motif ES_0h ES_0h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TLX2 2 datasets
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
Motif ES_0h ES_0h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
Motif ES_0h ES_0h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
Motif ES_0h ES_0h-VSX2_MA0726.2 7 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF317 1 dataset
ChIP WTC11 ENCFF537KXI 357 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
mix-a 2 datasets
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap
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