chr13 : 98,105,398 98,105,822
424 bp 84 TFs 0 linked genes
This 424 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:98,100,398 – 98,110,822
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AKAP8 1 dataset
ChIP HepG2 ENCFF478OVI 424 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 166 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 87 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 369 bp overlap
DBP 1 dataset
Motif DE_24h DE_24h-DBP_MA0639.2 10 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 81 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 362 bp overlap
EOMES 1 dataset
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
FERD3L 2 datasets
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
Motif DE_24h DE_24h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOXA1 53 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 303 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 268 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 424 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 280 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 254 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 306 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 270 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 305 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 322 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 276 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 388 bp overlap
ChIP 22Rv1_TFS GSE123618.FOXA1.22Rv1_TFS 245 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 346 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 339 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 307 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 309 bp overlap
Motif DE_24h DE_24h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF207NVJ 90 bp overlap
ChIP HepG2 ENCFF740VZW 269 bp overlap
ChIP Ishikawa ENCSR000BKW.FOXA1.Ishikawa 108 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 207 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 159 bp overlap
ChIP LNCaP_GSK-48H GSE114266.FOXA1.LNCaP_GSK-48H 213 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 241 bp overlap
ChIP MCF-7 ENCFF465LTH 272 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 286 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 343 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 174 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 148 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 177 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 211 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 209 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 324 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 293 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 268 bp overlap
ChIP T-47D GSE72249.FOXA1.T-47D 274 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 205 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 181 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 294 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 191 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 184 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 281 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 220 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 155 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 205 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 234 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 261 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 256 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 244 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 275 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 154 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 424 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 367 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 377 bp overlap
ChIP DE DE-FOXA2-2 375 bp overlap
Motif DE_24h DE_24h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF570ABM 220 bp overlap
FOXA3 1 dataset
Motif DE_24h DE_24h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_24h DE_24h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_24h DE_24h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_24h DE_24h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_24h DE_24h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_24h DE_24h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_24h DE_24h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_24h DE_24h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_24h DE_24h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_24h DE_24h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_24h DE_24h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_24h DE_24h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_24h DE_24h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_24h DE_24h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_24h DE_24h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_24h DE_24h-Foxj2_MA0614.1 8 bp overlap
Foxl2 1 dataset
Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_24h DE_24h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_24h DE_24h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_24h DE_24h-Foxq1_MA0040.2 10 bp overlap
HLF 2 datasets
Motif DE_24h DE_24h-HLF_MA0043.4 9 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
IRF9 1 dataset
ChIP HepG2 ENCFF654ZCV 424 bp overlap
MAX 2 datasets
ChIP HepG2 ENCFF479OHI 292 bp overlap
ChIP HepG2 ENCFF479OHI 304 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
NFIL3 2 datasets
Motif DE_24h DE_24h-NFIL3_MA0025.3 9 bp overlap
ChIP HepG2 ENCFF686VLI 337 bp overlap
POU1F1 1 dataset
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
POU2F1 7 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 326 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 424 bp overlap
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
ChIP HepG2 ENCFF422JZU 328 bp overlap
ChIP HepG2 ENCFF422JZU 59 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 295 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 325 bp overlap
POU2F2 1 dataset
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 271 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 111 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 218 bp overlap
Prdm15 2 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 167 bp overlap
STAT6 1 dataset
ChIP HepG2 ENCFF370LZV 424 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TEF 1 dataset
Motif DE_24h DE_24h-TEF_MA0843.2 10 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 112 bp overlap
Tbx6 1 dataset
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 224 bp overlap
ZBTB18 1 dataset
Motif DE_24h DE_24h-ZBTB18_MA0698.2 11 bp overlap
ZEB1 2 datasets
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ChIP HepG2 ENCFF808RQT 115 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 108 bp overlap
ZNF24 1 dataset
ChIP HepG2 ENCFF361LZL 131 bp overlap
ZNF362 1 dataset
ChIP HepG2 ENCFF256AZN 90 bp overlap
ZNF382 1 dataset
Motif DE_24h DE_24h-ZNF382_MA1594.1 24 bp overlap
ZNF44 1 dataset
ChIP HepG2 ENCFF984YCN 232 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 248 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 262 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 206 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 357 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 398 bp overlap