chr13 : 96,248,904 96,249,645
741 bp 93 TFs 2 linked genes
This 741 bp open chromatin element is linked to HS6ST3 and UGGT2 and is bound by 93 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
HS6ST3 159.2 kb Distal Multiome
UGGT2 195.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:96,243,904 – 96,254,645
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
Dmrt1 2 datasets
Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap
Motif DE_48h DE_48h-Dmrt1_MA1603.2 9 bp overlap
ELF1 2 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
EOMES 2 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 358 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
FEZF2 3 datasets
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 623 bp overlap
ChIP DE DE-FOXA2-2 638 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 727 bp overlap
GATA3 1 dataset
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 162 bp overlap
GATA4 12 datasets
ChIP DE DE-GATA4-1 655 bp overlap
ChIP DE DE-GATA4-2 739 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 653 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 612 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 642 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 17 datasets
ChIP DE DE-GATA6-1 741 bp overlap
ChIP DE DE-GATA6-2 695 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 693 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 741 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 659 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 741 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 741 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 710 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 715 bp overlap
ChIP foregut GSE117136.GATA6.foregut 583 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 575 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 469 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 523 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 296 bp overlap
GFI1 3 datasets
Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Gfi1B 3 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HNF4A 2 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
HNF4G 2 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
HOXB4 3 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 3 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD4 3 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap
IRF7 1 dataset
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_36h DE_36h-IRF9_MA0653.1 15 bp overlap
Irf1 3 datasets
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 397 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 244 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 88 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
Mecom 5 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 109 bp overlap
PKNOX1 1 dataset
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
POU4F1 3 datasets
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
Motif DE_48h DE_48h-POU4F1_MA0790.2 12 bp overlap
Motif DE_60h DE_60h-POU4F1_MA0790.2 12 bp overlap
POU4F3 3 datasets
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
Motif DE_48h DE_48h-POU4F3_MA0791.2 12 bp overlap
Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 482 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 482 bp overlap
SIX1 1 dataset
Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 591 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 481 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 377 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 313 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 413 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 469 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 337 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 315 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 489 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
Six4 1 dataset
Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 271 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
THRB 2 datasets
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
ZIM3 1 dataset
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN1 2 datasets
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN1_MA1585.2 9 bp overlap
ZKSCAN5 2 datasets
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF135 2 datasets
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
ZNF143 2 datasets
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
ZNF146 1 dataset
ChIP HEK293 ENCFF602LWH 153 bp overlap
ZNF257 2 datasets
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF263 2 datasets
Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
ZNF384 1 dataset
Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap
ZNF530 3 datasets
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF582 5 datasets
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
ZNF684 2 datasets
Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap
Motif DE_48h DE_48h-ZNF684_MA1600.2 14 bp overlap
ZNF692 2 datasets
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
Motif DE_48h DE_48h-ZNF692_MA1986.2 8 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
ZNF770 3 datasets
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap