chr13 : 84,605,855 – 84,606,613
758 bp 69 TFs 0 linked genes
This 758 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:84,600,855 – 84,611,613
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap
ASCL1 3 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 484 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 675 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 339 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 243 bp overlap
CTCF 127 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 361 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 200 bp overlap
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 216 bp overlap
ChIP Caco-2 ENCFF753NZV 445 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 131 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 139 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 146 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 186 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 166 bp overlap
ChIP GM23338 ENCFF531QOI 270 bp overlap
ChIP GM23338 ENCFF772DML 166 bp overlap
ChIP GM23338 ENCFF832KWE 605 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 349 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 384 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 382 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 167 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 291 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 223 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 388 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 274 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 310 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 219 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 374 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 170 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 268 bp overlap
ChIP HCT116 ENCFF003KHP 421 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 142 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 132 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 131 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 149 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 331 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 73 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 214 bp overlap
ChIP HFFc6 ENCFF005CJI 334 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 218 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 95 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 338 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 203 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 212 bp overlap
ChIP HeLa-S3 ENCFF626XQK 251 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 288 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 266 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 138 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 214 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 353 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 195 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 137 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 191 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 218 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 170 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 122 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 98 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 134 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 264 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 133 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 149 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 131 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 112 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 269 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 250 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 266 bp overlap
ChIP PC-3 ENCFF487TUI 485 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 289 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 107 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 224 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 481 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 624 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 257 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 147 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 256 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 159 bp overlap
ChIP WTC11 ENCFF658QVH 485 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 118 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP endodermal cell ENCFF471YCZ 375 bp overlap
ChIP endothelial cell ENCFF663LIE 596 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 187 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 331 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 179 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 411 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 377 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 455 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 245 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 273 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 198 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 304 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 185 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 221 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 240 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 259 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 335 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 274 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 386 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 180 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 238 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 200 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 188 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 559 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 570 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 333 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 113 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 296 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 437 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 284 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 491 bp overlap
CTCFL 3 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 149 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 113 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DPRX 1 dataset
Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap
E2F1 1 dataset
ChIP HeLa GSE22478.E2F1.HeLa 156 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 636 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 334 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 258 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 546 bp overlap
GSPT2 2 datasets
ChIP HEK293T GSE35197.GSPT2.HEK293T 131 bp overlap
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 184 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 176 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 222 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 80 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NOTCH3 2 datasets
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 284 bp overlap
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 468 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 125 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 191 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 238 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 262 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 182 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 284 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 104 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 216 bp overlap
ChIP hiPSC_IB7 GSE106870.RAD21.hiPSC_IB7 171 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 188 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 308 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
RREB1 2 datasets
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 211 bp overlap
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 291 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 129 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 301 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 154 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 108 bp overlap
TBL1X 2 datasets
ChIP HEK293T GSE35197.TBL1X.HEK293T 176 bp overlap
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 3 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 652 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 274 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 174 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 209 bp overlap
ZBTB18 2 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZEB1 3 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 73 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 192 bp overlap
ZNF211 2 datasets
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
Motif ES_0h ES_0h-ZNF211_MA1974.2 10 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 161 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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