chr13 : 46,551,351 46,551,459
108 bp 94 TFs 1 linked gene
This 108 bp open chromatin element is linked to LRCH1 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRCH1 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:46,546,351 – 46,556,459
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 108 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 106 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 108 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 108 bp overlap
CTCF 245 datasets
ChIP 22Rv1 ENCFF466OXN 108 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 108 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 108 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 108 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 108 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 108 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 108 bp overlap
ChIP B cell ENCFF506FKC 88 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 108 bp overlap
ChIP C4-2B ENCFF821XVN 108 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 108 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 108 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 69 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 65 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 108 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 72 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 96 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 108 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 108 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 108 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 108 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 108 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 108 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 66 bp overlap
ChIP GM23338 ENCFF832KWE 108 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 97 bp overlap
ChIP H9 ENCFF152GTF 103 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 64 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 79 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 90 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 69 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 108 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 108 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 108 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 108 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 89 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 108 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 55 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 108 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 108 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 69 bp overlap
ChIP HFFc6 ENCFF005CJI 108 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 90 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 108 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 53 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 108 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 92 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 88 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 64 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 108 bp overlap
ChIP ID00015 GSE76922.CTCF.ID00015 108 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 93 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 108 bp overlap
ChIP Jurkat GSE130140.CTCF.Jurkat 108 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 108 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 107 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 108 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 94 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 108 bp overlap
ChIP KMS-11_NSD2-Low GSE131651.CTCF.KMS-11_NSD2-Low 108 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 108 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 108 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 108 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 108 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 108 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 108 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 53 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 108 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 108 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 108 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 63 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 108 bp overlap
ChIP MDM GSE103477.CTCF.MDM 101 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 71 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 108 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 108 bp overlap
ChIP NPC GSE115407.CTCF.NPC 108 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 108 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 108 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 108 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 92 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 108 bp overlap
ChIP PC-9 ENCFF539ULB 74 bp overlap
ChIP Panc1 ENCFF056JQX 108 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 108 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 108 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 108 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 108 bp overlap
ChIP RWPE1 ENCFF200GQF 108 bp overlap
ChIP RWPE2 ENCFF911IEE 108 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 63 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 108 bp overlap
ChIP SK-N-SH ENCFF575DMG 107 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 108 bp overlap
ChIP SLK_CTCF-KD GSE138105.CTCF.SLK_CTCF-KD 108 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 108 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 108 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 95 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 69 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 74 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 108 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 90 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 108 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 94 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 95 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 75 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 108 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 101 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 108 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 108 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 79 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 108 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 54 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 108 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 108 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 81 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 108 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 108 bp overlap
ChIP VCaP ENCFF858YQT 108 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 108 bp overlap
ChIP activated B cell ENCFF418DVI 104 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 70 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 70 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 108 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 108 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 78 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 108 bp overlap
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 81 bp overlap
ChIP brain ENCFF685VRG 100 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 108 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 108 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 108 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 108 bp overlap
ChIP chondrocyte ENCFF134ORZ 108 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 108 bp overlap
ChIP colon_sigmoid ENCSR721AHD.CTCF.colon_sigmoid 108 bp overlap
ChIP colon_transverse ENCSR236YGF.CTCF.colon_transverse 108 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 94 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 83 bp overlap
ChIP colon_transverse ENCSR608WPS.CTCF.colon_transverse 63 bp overlap
ChIP colon_transverse ENCSR769WKR.CTCF.colon_transverse 53 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 108 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 108 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 108 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 108 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF092NXX 50 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 95 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 65 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 108 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 96 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 93 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 108 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 108 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 108 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 108 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 67 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 60 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 108 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 108 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR074SFL.CTCF.esophagus_muscularis-mucosa 55 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 108 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 106 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 108 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 108 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 102 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 86 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 89 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 108 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 87 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 51 bp overlap
ChIP gastrocnemius-medialis ENCSR428BKN.CTCF.gastrocnemius-medialis 50 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 80 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 78 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 108 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 108 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 108 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 108 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 108 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 108 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 108 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 80 bp overlap
ChIP heart right ventricle ENCFF027ORH 60 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 108 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 69 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 94 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 81 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 108 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 86 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 74 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 108 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 96 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 108 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 101 bp overlap
ChIP lung_left_upper-lobe ENCSR799TJD.CTCF.lung_left_upper-lobe 66 bp overlap
ChIP lymphoblast GSE155324.CTCF.lymphoblast 108 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 108 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 108 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 108 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 107 bp overlap
ChIP nerve_tibial ENCSR434XLP.CTCF.nerve_tibial 97 bp overlap
ChIP nerve_tibial ENCSR469POZ.CTCF.nerve_tibial 77 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 84 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 108 bp overlap
ChIP neuron GSE115407.CTCF.neuron 108 bp overlap
ChIP neutrophil ENCSR785YRL.CTCF.neutrophil 108 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 108 bp overlap
ChIP osteocyte ENCFF929FPD 66 bp overlap
ChIP ovary ENCSR493APD.CTCF.ovary 62 bp overlap
ChIP pancreas_body ENCSR572DUJ.CTCF.pancreas_body 74 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 69 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 108 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 108 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 108 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 108 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 108 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 108 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 108 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 61 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 55 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 95 bp overlap
ChIP right atrium auricular region ENCFF696NTN 55 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 108 bp overlap
ChIP spleen ENCFF065CBS 108 bp overlap
ChIP spleen ENCFF121QGK 62 bp overlap
ChIP spleen ENCFF326DUY 108 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 108 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 108 bp overlap
ChIP spleen ENCSR482PMN.CTCF.spleen 108 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 108 bp overlap
ChIP spleen ENCSR028YEV.CTCF.spleen 108 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 104 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 108 bp overlap
ChIP stomach ENCSR361KVZ.CTCF.stomach 65 bp overlap
ChIP testis ENCSR494TNM.CTCF.testis 108 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 79 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 108 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 108 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 101 bp overlap
ChIP thyroid-gland ENCSR331OGX.CTCF.thyroid-gland 51 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 51 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 72 bp overlap
ChIP uterus ENCSR798NVH.CTCF.uterus 85 bp overlap
ChIP vagina ENCSR606TNN.CTCF.vagina 53 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 74 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 64 bp overlap
ETV6 2 datasets
ChIP GM12878 ENCFF348ABN 104 bp overlap
ChIP GM12878 ENCSR597VGC.ETV6.GM12878 108 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCFF867JAR 106 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF352QVM 64 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF179TAD 51 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 60 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 95 bp overlap
ChIP GM12878 ENCFF918AID 62 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 108 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 54 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 108 bp overlap
KLF16 1 dataset
ChIP HepG2 ENCFF969FFI 64 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 78 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
MAX 2 datasets
ChIP A549 ENCFF310XGQ 60 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 108 bp overlap
MED1 1 dataset
ChIP MDA-MB-231_LQ GSE95121.MED1.MDA-MB-231_LQ 108 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NFIC 1 dataset
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 108 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PHF8 1 dataset
ChIP HepG2 ENCFF065NWR 108 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 108 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 108 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 76 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RAD21 23 datasets
ChIP GP5D GSE51234.RAD21.GP5D 71 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 50 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 108 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 75 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 108 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 108 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 108 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 108 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 108 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 62 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 108 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 108 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 58 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 74 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 79 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 83 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 100 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 64 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 108 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 103 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 52 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 108 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 108 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
ChIP THP-6_shCtrl GSE138516.RBPJ.THP-6_shCtrl 108 bp overlap
REPIN1 2 datasets
ChIP HEK293 ENCFF457XPY 108 bp overlap
ChIP HEK293 ENCSR146NLL.REPIN1.HEK293 108 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 108 bp overlap
ChIP K562 ENCFF022XJR 108 bp overlap
ChIP K562 ENCFF653BQJ 108 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 101 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 57 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 108 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 108 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 108 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 50 bp overlap
SMC1 5 datasets
ChIP DKO GSE131606.SMC1.DKO 108 bp overlap
ChIP HAP1 GSE94992.SMC1.HAP1 108 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 77 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 108 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 73 bp overlap
SMC1A 3 datasets
ChIP HCT-116 GSE112000.SMC1A.HCT-116 108 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 94 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 60 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 86 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 108 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 83 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 105 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 75 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 108 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 73 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 108 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 59 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCFF968PWB 65 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 108 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCFF641ICT 65 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 74 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 108 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 107 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 77 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 80 bp overlap