chr12 : 127,147,777 – 127,148,285
508 bp 66 TFs 3 linked genes
This 508 bp open chromatin element is linked to ENSG00000278266, ENSG00000286791, and ENSG00000256001 and is bound by 66 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000278266 628 bp At TSS Proximity
ENSG00000286791 1.2 kb Proximal Proximity
ENSG00000256001 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:127,142,777 – 127,153,285
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP WA01 ENCSR850KIP.ASH2L.WA01 90 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 381 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 252 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 220 bp overlap
ATOH7 1 dataset
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 204 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 95 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 215 bp overlap
BRD4 5 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 503 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 273 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 54 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 182 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 218 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 217 bp overlap
ChIP K562 ENCFF673OEZ 383 bp overlap
CEBPB 4 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 138 bp overlap
ChIP K562 ENCFF189VBN 197 bp overlap
ChIP K562 ENCFF584CTB 488 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 188 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
ChIP K-562 ENCSR000BVY.CEBPD.K-562 119 bp overlap
CHD1 1 dataset
ChIP K562 ENCFF118VJV 266 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 263 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ChIP BLaER1 ENCFF680YXW 275 bp overlap
ChIP BLaER1 ENCFF844FIP 251 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 304 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 324 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 287 bp overlap
ChIP K-562 ENCSR000EGE.EP300.K-562 126 bp overlap
ChIP K562 ENCFF226VMS 317 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 310 bp overlap
ChIP DE DE-FOXA2-2 340 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 235 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 196 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 322 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 508 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 404 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 332 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 255 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 505 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 485 bp overlap
ChIP K562 ENCFF055GAZ 477 bp overlap
ChIP K562 ENCFF317JJX 281 bp overlap
ChIP K562 ENCFF317JJX 491 bp overlap
IKZF1 4 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 502 bp overlap
ChIP K562 ENCFF348IBL 307 bp overlap
ChIP K562 ENCFF771OHZ 194 bp overlap
ChIP K562 ENCFF771OHZ 391 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 170 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 508 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 356 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 150 bp overlap
ChIP K562 ENCFF524IJO 382 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 264 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 252 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 365 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF074XRJ 250 bp overlap
MNT 7 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 386 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 357 bp overlap
ChIP K-562 ENCSR979QYJ.MNT.K-562 333 bp overlap
ChIP K562 ENCFF342DNS 503 bp overlap
ChIP K562 ENCFF342DNS 416 bp overlap
ChIP K562 ENCFF450LDL 431 bp overlap
ChIP K562 ENCFF820IGH 475 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 51 bp overlap
MYC 4 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 183 bp overlap
ChIP K-562 ENCSR000EZU.MYC.K-562 212 bp overlap
ChIP K-562 ENCSR000EGS.MYC.K-562 141 bp overlap
ChIP K562 ENCFF988ZRU 387 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 279 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 137 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 320 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 267 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 301 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 415 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 239 bp overlap
ChIP hESC GSE18292.NANOG.hESC 98 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
NFRKB 2 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 64 bp overlap
ChIP K562 ENCFF057YFW 207 bp overlap
NIPBL 3 datasets
ChIP hESC GSE64758.NIPBL.hESC 185 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 253 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 214 bp overlap
NR2C2 3 datasets
ChIP K562 ENCFF750AXF 218 bp overlap
ChIP K562 ENCFF750AXF 422 bp overlap
ChIP K562 ENCFF750AXF 508 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 113 bp overlap
NR4A1 1 dataset
ChIP K-562 ENCSR692RET.NR4A1.K-562 188 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 240 bp overlap
ChIP K562 ENCFF836GHX 119 bp overlap
ChIP K562 ENCFF836GHX 331 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 271 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 63 bp overlap
POU5F1 5 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 316 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 211 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 155 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 269 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 248 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 243 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 311 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 321 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 104 bp overlap
ChIP K562 ENCFF410ORC 135 bp overlap
SRF 1 dataset
ChIP K-562 ENCSR582IAO.SRF.K-562 201 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 80 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 177 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 135 bp overlap
ChIP NPC GSE154479.TCF3.NPC 196 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 365 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 364 bp overlap
USF1 2 datasets
ChIP K-562 ENCSR000BKT.USF1.K-562 137 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 135 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 213 bp overlap
ZNF257 1 dataset
ChIP K-562 ENCSR492FKD.ZNF257.K-562 169 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 227 bp overlap
ZNF609 2 datasets
ChIP K562 ENCFF878VFO 278 bp overlap
ChIP K562 ENCFF878VFO 481 bp overlap
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