chr12 : 105,090,343 – 105,090,738
395 bp 94 TFs 0 linked genes
This 395 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:105,085,343 – 105,095,738
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_24h DE_24h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 2 datasets
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Motif DE_24h DE_24h-Arnt_MA0004.1 6 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCFF521IZR 377 bp overlap
CLOCK 2 datasets
Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap
Motif DE_24h DE_24h-CLOCK_MA0819.3 7 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF772DML 100 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 56 bp overlap
ChIP K562 ENCFF082GOI 94 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 239 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 361 bp overlap
ChIP H1 ENCFF785DWK 282 bp overlap
EGR1 2 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
Motif DE_24h DE_24h-EGR1_MA0162.5 10 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 148 bp overlap
EGR3 2 datasets
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
Motif DE_24h DE_24h-EGR3_MA0732.2 11 bp overlap
EGR4 2 datasets
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
Motif DE_24h DE_24h-EGR4_MA0733.2 11 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 395 bp overlap
EZH2 1 dataset
ChIP fibroblast of dermis ENCFF029VZK 380 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Isl1 1 dataset
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 9 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
Motif DE_24h DE_24h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 283 bp overlap
ChIP H1 ENCFF914VQY 194 bp overlap
ChIP Ishikawa ENCFF064TDQ 395 bp overlap
ChIP K562 ENCFF524IJO 356 bp overlap
ChIP MCF-7 ENCFF169IXS 395 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 205 bp overlap
ChIP WTC11 ENCFF223QFY 395 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
MNT 4 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
Motif DE_24h DE_24h-MNT_MA0825.2 6 bp overlap
ChIP K562 ENCFF820IGH 395 bp overlap
ChIP MCF-7 ENCFF144ZFZ 395 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
ChIP H1 ENCFF963FZS 319 bp overlap
MYC 3 datasets
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
Motif DE_24h DE_24h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 264 bp overlap
MYCN 2 datasets
Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap
Motif DE_24h DE_24h-MYCN_MA0104.5 8 bp overlap
MZF1 2 datasets
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Motif DE_24h DE_24h-MZF1_MA0056.3 8 bp overlap
Mlxip 2 datasets
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
Motif DE_24h DE_24h-Mlxip_MA0622.2 6 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 241 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR2C1 4 datasets
ChIP GM12878 ENCFF101ELO 313 bp overlap
ChIP GM12878 ENCSR784VIQ.NR2C1.GM12878 177 bp overlap
ChIP K562 ENCFF239KMA 360 bp overlap
ChIP K562 ENCFF568JLK 364 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Npas2 2 datasets
Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap
Motif DE_24h DE_24h-Npas2_MA0626.2 8 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PBX3 2 datasets
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 112 bp overlap
PKNOX1 7 datasets
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 286 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 288 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 180 bp overlap
ChIP K562 ENCFF236IUS 289 bp overlap
ChIP MCF-7 ENCFF116OCS 336 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 223 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 279 bp overlap
ChIP H1 ENCFF566JSR 318 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 3 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 3 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 8 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 395 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 323 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 380 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 121 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 144 bp overlap
POU5F1B 3 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 395 bp overlap
PPARA::RXRA 1 dataset
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RFX4 1 dataset
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SRF 2 datasets
ChIP GM12878 ENCFF878IIX 293 bp overlap
ChIP H1 ENCFF036PEF 202 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 295 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 128 bp overlap
TBP 4 datasets
ChIP hESC GSE122298.TBP.hESC 129 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 85 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 121 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 114 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 122 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
YY1 11 datasets
ChIP GM12878 ENCFF908JTL 112 bp overlap
ChIP GM12891 ENCFF460SIS 325 bp overlap
ChIP GM12892 ENCFF802MHJ 302 bp overlap
ChIP GM12892 ENCFF802MHJ 160 bp overlap
ChIP H1 ENCFF524BTL 135 bp overlap
ChIP Ishikawa ENCFF505XQX 327 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 210 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ChIP NT2/D1 ENCFF999MII 260 bp overlap
ChIP NT2/D1 ENCFF999MII 247 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 301 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_24h DE_24h-ZFP42_MA1651.2 13 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif DE_24h DE_24h-ZNF816_MA1719.2 15 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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