chr12 : 76,874,333 76,874,854
521 bp 71 TFs 2 linked genes
This 521 bp open chromatin element is linked to ENSG00000257910 and CSRP2 and is bound by 71 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000257910 3.3 kb Proximal Proximity
CSRP2 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:76,869,333 – 76,879,854
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 56 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 186 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 234 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 141 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 267 bp overlap
ChIP LNCaP GSE43720.AR.LNCaP 150 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 282 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 259 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 306 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 209 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 135 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 175 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 122 bp overlap
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 166 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 235 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 213 bp overlap
ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 220 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 230 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 132 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 194 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 161 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 223 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 196 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 251 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 281 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 263 bp overlap
ChIP VCaP GSE148358.AR.VCaP 208 bp overlap
ChIP VCaP GSE32892.AR.VCaP 176 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 179 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 174 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 521 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 359 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 194 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 200 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 211 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 198 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 113 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 199 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 175 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 160 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 222 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 260 bp overlap
ChIP VCaP_siNON-EtOH GSE122572.AR.VCaP_siNON-EtOH 197 bp overlap
ChIP prostate GSE65478.AR.prostate 215 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 372 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 185 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 204 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 102 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 191 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 110 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 255 bp overlap
ChIP prostate-cancer_shCXXC5 GSE136128.AR.prostate-cancer_shCXXC5 159 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 168 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 223 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 292 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 189 bp overlap
ARID1A 2 datasets
ChIP LNCaP GSE94682.ARID1A.LNCaP 219 bp overlap
ChIP LNCaP_r1881 GSE94682.ARID1A.LNCaP_r1881 207 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 238 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 246 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 229 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 270 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 213 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
E2F1 1 dataset
ChIP LNCaP_shCON GSE94958.E2F1.LNCaP_shCON 239 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
ERF 4 datasets
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ChIP VCaP GSE98809.ERF.VCaP 219 bp overlap
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 232 bp overlap
ChIP VCaP_DOX GSE83650.ERF.VCaP_DOX 265 bp overlap
ERG 10 datasets
ChIP VCaP GSE49091.ERG.VCaP 103 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 225 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 225 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 197 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 175 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 285 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 203 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 215 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 446 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 363 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ChIP LNCaP GSE47120.ETV1.LNCaP 232 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 236 bp overlap
FOXA1 10 datasets
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 187 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 62 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 196 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 186 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 166 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 230 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 138 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 181 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 209 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 195 bp overlap
GABPA 3 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 302 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 148 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 234 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 234 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 254 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 211 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 220 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 221 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 207 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 268 bp overlap
HOXB13 30 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 266 bp overlap
ChIP LNCaP GSE96652.HOXB13.LNCaP 227 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 196 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 212 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 146 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 157 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 268 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 214 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 177 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 218 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 280 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 213 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 167 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 170 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 227 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 203 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 250 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 251 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 303 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 289 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 238 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 250 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 279 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 213 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 209 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 300 bp overlap
ChIP prostate_P5 GSE130408.HOXB13.prostate_P5 162 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 285 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 183 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 288 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MSANTD3 2 datasets
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_24h DE_24h-MSANTD3_MA1523.2 7 bp overlap
MYCN 1 dataset
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 127 bp overlap
NANOG 3 datasets
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 96 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 198 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 339 bp overlap
NKX2-2 2 datasets
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_24h DE_24h-NKX2-2_MA1645.2 8 bp overlap
NR3C1 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 108 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 421 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 402 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 113 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 257 bp overlap
RARA::RXRG 2 datasets
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
Motif DE_24h DE_24h-RARARXRG_MA1149.2 17 bp overlap
RELA 4 datasets
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 312 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 321 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 332 bp overlap
ChIP LNCaP_TNFA GSE83860.RELA.LNCaP_TNFA 199 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 430 bp overlap
Runx1 3 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF896IJG 281 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 115 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif DE_24h DE_24h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
Stat4 3 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif DE_24h DE_24h-Stat4_MA0518.2 10 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 252 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 247 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 181 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 353 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
ChIP HEK293 GSE76494.ZNF263.HEK293 130 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif DE_24h DE_24h-ZNF331_MA1726.2 10 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap