chr12 : 76,092,418 76,092,810
392 bp 65 TFs 1 linked gene
This 392 bp open chromatin element is linked to NAP1L1 and is bound by 65 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NAP1L1 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:76,087,418 – 76,097,810
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 20 datasets
ChIP LNCaP GSE110655.AR.LNCaP 82 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 56 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 107 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 83 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 99 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 119 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 74 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 176 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 51 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 71 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 114 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 92 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 259 bp overlap
ChIP prostate-cancer_1335 GSE118845.AR.prostate-cancer_1335 164 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 64 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 174 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 110 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 67 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 67 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 392 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 230 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 56 bp overlap
BMI1 3 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 311 bp overlap
ChIP K-562 ENCSR782WRO.BMI1.K-562 193 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 335 bp overlap
BRD4 4 datasets
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 173 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 90 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 79 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.BRD4.LNCaP-clone-FGC_DHT-DMSO 244 bp overlap
COMMD3-BMI1,BMI1 3 datasets
ChIP GM12878 ENCFF249AMT 371 bp overlap
ChIP K562 ENCFF139VAJ 305 bp overlap
ChIP MCF-7 ENCFF570JPP 281 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 392 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 392 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF313FYC 326 bp overlap
CTCF 1 dataset
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 217 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 220 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 245 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 88 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 307 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 32 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 79 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 213 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 51 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 100 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 299 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 124 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 59 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 56 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 51 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 334 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 67 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 58 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 162 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 114 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 196 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 124 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 240 bp overlap
ChIP LNCaP_GFP_shFOXA1 GSE128883.FOXA1.LNCaP_GFP_shFOXA1 352 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 124 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 104 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 65 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 192 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 104 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 96 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 363 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 117 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 77 bp overlap
ChIP prostate_P1_T GSE130408.FOXA1.prostate_P1_T 71 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 141 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 97 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 69 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 126 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 255 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 208 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 85 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 143 bp overlap
GRHL1 1 dataset
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 225 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 60 bp overlap
HOXB13 24 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 101 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 75 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 55 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 59 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 87 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 63 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 109 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 113 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 167 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 68 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 138 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 95 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 96 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 97 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 88 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 70 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 120 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 91 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 104 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 104 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 88 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 56 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 86 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 136 bp overlap
HSF1 9 datasets
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 347 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 202 bp overlap
ChIP MCF-7 ENCFF586GQF 317 bp overlap
ChIP MCF-7 ENCSR062HDL.HSF1.MCF-7 283 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 392 bp overlap
ChIP NCI-H838 GSE38901.HSF1.NCI-H838 276 bp overlap
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 267 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 369 bp overlap
ChIP colon_tumor GSE38901.HSF1.colon_tumor 257 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 139 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 142 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 223 bp overlap
KLF9 5 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 98 bp overlap
ChIP HEK293 ENCFF588INF 347 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 214 bp overlap
ChIP MCF-7 ENCFF618FCM 372 bp overlap
ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 224 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 149 bp overlap
MED1 1 dataset
ChIP VCaP_Veh GSE125245.MED1.VCaP_Veh 217 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 2 datasets
ChIP K-562 ENCSR000EGZ.MXI1.K-562 149 bp overlap
ChIP K562 ENCFF336XYS 325 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 127 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 109 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 215 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 164 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 164 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 129 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 63 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 261 bp overlap
ChIP K562 ENCFF286KMN 317 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 201 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 176 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 392 bp overlap
ChIP HEK293T ENCFF174WDB 341 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 215 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 387 bp overlap
ChIP K562 ENCFF236IUS 349 bp overlap
ChIP MCF-7 ENCFF116OCS 229 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 285 bp overlap
POLR2A 9 datasets
ChIP H1 ENCFF566JSR 392 bp overlap
ChIP H1 ENCFF833NJP 282 bp overlap
ChIP K562 ENCFF137JSF 307 bp overlap
ChIP body of pancreas ENCFF501FEC 278 bp overlap
ChIP body of pancreas ENCFF675RCN 248 bp overlap
ChIP body of pancreas ENCFF727UBE 175 bp overlap
ChIP thyroid gland ENCFF979LRR 271 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 286 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 269 bp overlap
POU2F1 4 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 392 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 392 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 392 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 392 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 271 bp overlap
ChIP K562 ENCFF688UKW 267 bp overlap
RFX1 10 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 392 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 392 bp overlap
ChIP K562 ENCFF421AVO 392 bp overlap
ChIP K562 ENCFF809XVG 392 bp overlap
ChIP MCF-7 ENCFF782EZS 392 bp overlap
ChIP MCF-7 ENCFF973QAD 343 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 392 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 378 bp overlap
RFX2 3 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
ChIP GP5D GSE51234.RFX2.GP5D 320 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 2 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 348 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SIX1 2 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SP1 2 datasets
ChIP K562 ENCFF907BMO 357 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 157 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 318 bp overlap
SPIC 1 dataset
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
SRF 1 dataset
ChIP K562 ENCFF766EOO 312 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 83 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 132 bp overlap
TBP 7 datasets
ChIP H1 ENCFF859IIO 307 bp overlap
ChIP K-562 GSE55306.TBP.K-562 320 bp overlap
ChIP K562 ENCFF901UYM 272 bp overlap
ChIP hESC GSE122298.TBP.hESC 199 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 184 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 209 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 188 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 71 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 61 bp overlap
TOE1 1 dataset
ChIP K562 ENCFF728FRA 87 bp overlap
TOP1 1 dataset
ChIP LNCaP_DHT GSE63202.TOP1.LNCaP_DHT 103 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 186 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 76 bp overlap
ChIP MCF-7 ENCFF044DWL 140 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF184 2 datasets
ChIP K-562 ENCSR621ATC.ZNF184.K-562 225 bp overlap
ChIP K562 ENCFF717TPQ 142 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap