chr1 : 209,583,570 – 209,583,807
237 bp 94 TFs 1 linked gene
This 237 bp open chromatin element is linked to CAMK1G and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CAMK1G at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:209,578,570 – 209,588,807
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 171 bp overlap
Alx4 1 dataset
Motif ES_0h ES_0h-Alx4_MA0853.2 12 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
Arx 1 dataset
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 125 bp overlap
BRD4 8 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 237 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 82 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 237 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 126 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 141 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 237 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 237 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 169 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 198 bp overlap
CDX2 1 dataset
Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 139 bp overlap
CTCF 4 datasets
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 128 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 210 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 237 bp overlap
ChIP neural cell ENCFF335ADI 237 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
DPRX 1 dataset
Motif ES_0h ES_0h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dmbx1 1 dataset
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 138 bp overlap
EN2 1 dataset
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
FOSL2 3 datasets
ChIP SK-N-SH ENCFF127ZDW 68 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 85 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 85 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 108 bp overlap
GBX1 1 dataset
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
Hmx2 1 dataset
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif ES_0h ES_0h-Hoxd13_MA0909.4 7 bp overlap
JUND 3 datasets
ChIP SK-N-SH ENCFF551NEQ 86 bp overlap
ChIP SK-N-SH ENCFF971JKN 105 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 57 bp overlap
LBX1 1 dataset
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCFF285LXR 189 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCFF682IKN 159 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 89 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 237 bp overlap
MORC2 2 datasets
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 237 bp overlap
ChIP HeLa_V5-MORC2-KO-W505A-MORC2-mut GSE95451.MORC2.HeLa_V5-MORC2-KO-W505A-MORC2-mut 237 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 137 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 128 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NCAPH2 7 datasets
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 237 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 204 bp overlap
ChIP IMR-90_Triptolide-30min GSE118494.NCAPH2.IMR-90_Triptolide-30min 237 bp overlap
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 237 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 237 bp overlap
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 237 bp overlap
ChIP IMR-90_ctrl_OIS GSE118494.NCAPH2.IMR-90_ctrl_OIS 237 bp overlap
NKX2-2 1 dataset
Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 221 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
PDX1 2 datasets
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
ChIP islet ERP001456.PDX1.islet 115 bp overlap
PHOX2A 1 dataset
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POLR2A 5 datasets
ChIP PFSK-1 ENCFF576NIT 212 bp overlap
ChIP SK-N-SH ENCFF683PFH 222 bp overlap
ChIP adrenal gland ENCFF892SFM 198 bp overlap
ChIP neural cell ENCFF604SPB 193 bp overlap
ChIP ovary ENCFF425PQK 237 bp overlap
PROP1 1 dataset
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
PRRX2 1 dataset
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 182 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RELA 6 datasets
ChIP HAEC GSE89970.RELA.HAEC 185 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 130 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 125 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 148 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 237 bp overlap
REST 3 datasets
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 113 bp overlap
ChIP neural ENCSR000BTV.REST.neural 201 bp overlap
ChIP neural cell ENCFF882LXX 144 bp overlap
RFX1 5 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 190 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 205 bp overlap
ChIP K562 ENCFF421AVO 237 bp overlap
ChIP MCF-7 ENCFF782EZS 165 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 227 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 237 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 237 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 237 bp overlap
SIN3A 4 datasets
ChIP PFSK-1 ENCFF218MAY 236 bp overlap
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 136 bp overlap
ChIP SK-N-SH ENCFF931NFD 214 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 237 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 237 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 68 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 94 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 181 bp overlap
SOX18 1 dataset
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 234 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 184 bp overlap
SOX8 1 dataset
Motif ES_0h ES_0h-SOX8_MA0868.3 7 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 139 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 174 bp overlap
TAF1 7 datasets
ChIP H1 ENCFF478SZO 237 bp overlap
ChIP PFSK-1 ENCFF982LZL 237 bp overlap
ChIP PFSK1 ENCSR000BQN.TAF1.PFSK1 179 bp overlap
ChIP SK-N-SH ENCFF630ERV 237 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 237 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 177 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 178 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 237 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 216 bp overlap
ChIP hESC GSE122298.TBP.hESC 185 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 191 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 122 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 215 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 132 bp overlap
ChIP SK-N-SH ENCFF754TJT 120 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 234 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 108 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 167 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 64 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZSCAN21 1 dataset
Motif ES_0h ES_0h-ZSCAN21_MA2336.1 7 bp overlap
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