chr12 : 14,417,805 14,418,062
257 bp 72 TFs 0 linked genes
This 257 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:14,412,805 – 14,423,062
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 112 bp overlap
BCL6B 2 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
BRD4 9 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 240 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 200 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 93 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 257 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 177 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 246 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 226 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 153 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 198 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 114 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 183 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 135 bp overlap
CIITA 1 dataset
ChIP Raji_AB1 GSE52941.CIITA.Raji_AB1 236 bp overlap
CREB1 3 datasets
ChIP H1 ENCFF955PMP 237 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 170 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 154 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 80 bp overlap
CTCF 4 datasets
ChIP dorsolateral prefrontal cortex ENCFF235CPK 204 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 257 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 241 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 257 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 149 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 107 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 103 bp overlap
EP300 5 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 164 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 145 bp overlap
ChIP SK-N-SH ENCFF829RWA 257 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 194 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 225 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_60h DE_60h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 182 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 54 bp overlap
FOXA1 7 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 104 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 144 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 101 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 199 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 257 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 251 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 75 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 248 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 257 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 252 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 257 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 162 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 82 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 116 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 257 bp overlap
JMJD6 1 dataset
ChIP CHP-134 GSE129588.JMJD6.CHP-134 227 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 195 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 163 bp overlap
MED1 3 datasets
ChIP G296S GSE85628.MED1.G296S 183 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 183 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 213 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 66 bp overlap
MSC 2 datasets
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 188 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 231 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 257 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 208 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 231 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 257 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 257 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 257 bp overlap
ChIP hESC GSE18292.NANOG.hESC 173 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 257 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 177 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 173 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 149 bp overlap
NFYA 6 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap
ChIP HeLa-S3 ENCFF016YWF 257 bp overlap
ChIP HeLa-S3 ENCSR000DNS.NFYA.HeLa-S3 175 bp overlap
ChIP Hep-G2 ENCSR124APT.NFYA.Hep-G2 127 bp overlap
ChIP K-562 GSE26439.NFYA.K-562 154 bp overlap
NFYB 7 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
ChIP HeLa-S3 ENCFF854TNJ 257 bp overlap
ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 206 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 233 bp overlap
ChIP HepG2 ENCFF174VYX 257 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 215 bp overlap
NFYC 4 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF836FYP 257 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 257 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 110 bp overlap
NUTM1 2 datasets
ChIP NMC24335 GSE96775.NUTM1.NMC24335 134 bp overlap
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 257 bp overlap
OLIG2 3 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 257 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 257 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 257 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 176 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF727UBE 257 bp overlap
ChIP endothelial cell of umbilical vein ENCFF131DWO 137 bp overlap
ChIP neural cell ENCFF604SPB 257 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 191 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 257 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 120 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 196 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 217 bp overlap
RFX5 18 datasets
ChIP A-549 ENCSR064LJN.RFX5.A-549 257 bp overlap
ChIP A549 ENCFF220PEX 242 bp overlap
ChIP GM12878 ENCFF768MIX 257 bp overlap
ChIP GM12878 ENCSR000DZW.RFX5.GM12878 154 bp overlap
ChIP H1 ENCFF605EGG 241 bp overlap
ChIP HeLa-S3 ENCFF703XPB 213 bp overlap
ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 239 bp overlap
ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 255 bp overlap
ChIP HepG2 ENCFF065UQI 214 bp overlap
ChIP IMR-90 ENCFF886KPO 206 bp overlap
ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 257 bp overlap
ChIP K-562 ENCSR000EGO.RFX5.K-562 257 bp overlap
ChIP K562 ENCFF734TCX 186 bp overlap
ChIP MCF-7 ENCFF983ILY 257 bp overlap
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 257 bp overlap
ChIP SK-N-SH ENCFF755HLO 226 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 257 bp overlap
ChIP WA01 ENCSR000ECF.RFX5.WA01 257 bp overlap
RFXANK 1 dataset
ChIP HepG2 ENCFF276CBT 257 bp overlap
RFXAP 2 datasets
ChIP Hep-G2 ENCSR524RLU.RFXAP.Hep-G2 257 bp overlap
ChIP HepG2 ENCFF359QOX 219 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 245 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 149 bp overlap
SMAD4 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 196 bp overlap
ChIP KGN_TGF GSE138496.SMAD4.KGN_TGF 114 bp overlap
SMARCA4 9 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 257 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 251 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 256 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 257 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 257 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 202 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 181 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 257 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 257 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 147 bp overlap
SNAI2 2 datasets
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 83 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 229 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 257 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 197 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 251 bp overlap
ChIP NPC GSE122631.SOX2.NPC 140 bp overlap
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 257 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 257 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 208 bp overlap
STAT3 4 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 172 bp overlap
ChIP MCF-7_jc5843 GSE126004.STAT3.MCF-7_jc5843 250 bp overlap
ChIP MCF-7_jc5845 GSE126004.STAT3.MCF-7_jc5845 224 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 241 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 131 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 123 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 212 bp overlap
YY1 11 datasets
ChIP ALL GSE145549.YY1.ALL 257 bp overlap
ChIP GM12892 ENCSR000BLT.YY1.GM12892 118 bp overlap
ChIP H1 ENCFF524BTL 257 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 104 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 99 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 137 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 198 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 181 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 223 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 257 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 152 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF350 1 dataset
ChIP HEK293 GSE76494.ZNF350.HEK293 191 bp overlap
ZNF416 2 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 233 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap