chr12 : 2,230,136 2,230,499
363 bp 71 TFs 0 linked genes
This 363 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:2,225,136 – 2,235,499
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 189 bp overlap
AR 2 datasets
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 125 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 241 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 274 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 363 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 363 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 219 bp overlap
BRD4 6 datasets
ChIP 402-91 GSE111253.BRD4.402-91 363 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 239 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 167 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 145 bp overlap
ChIP hESC GSE33281.BRD4.hESC 136 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 191 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 363 bp overlap
ChIP SKNO-1 GSE23730.CBFB.SKNO-1 194 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 216 bp overlap
CTCF 86 datasets
ChIP 22Rv1 ENCFF466OXN 363 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 262 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 300 bp overlap
ChIP AG04449 ENCFF248MBD 179 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 179 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 163 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 155 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 137 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 198 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 140 bp overlap
ChIP GM23338 ENCFF772DML 131 bp overlap
ChIP H1 ENCFF414GZI 173 bp overlap
ChIP H1 ENCFF764RHO 176 bp overlap
ChIP H9 ENCFF152GTF 200 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 144 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 230 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 132 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 227 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 211 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 150 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 162 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 143 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 106 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 189 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 232 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 182 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 247 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 114 bp overlap
ChIP K562 ENCFF400DFR 184 bp overlap
ChIP K562 ENCFF430KTH 275 bp overlap
ChIP K562 ENCFF598YSU 192 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 182 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 363 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 363 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 363 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 151 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 105 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 204 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 108 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 124 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 147 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 205 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 246 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 212 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 218 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 173 bp overlap
ChIP endodermal cell ENCFF471YCZ 288 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 178 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 176 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 161 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 230 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 202 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 113 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 231 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 123 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 97 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 209 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 194 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 319 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 239 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 166 bp overlap
ChIP heart left ventricle ENCFF354HOQ 302 bp overlap
ChIP heart left ventricle ENCFF548XHH 243 bp overlap
ChIP heart left ventricle ENCFF888ERQ 307 bp overlap
ChIP heart right ventricle ENCFF979TCT 267 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 179 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 220 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 134 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 195 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 114 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 232 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 173 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 119 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 227 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 225 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 141 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 208 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 141 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 286 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 181 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 228 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 151 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 215 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 328 bp overlap
ChIP K-562 ENCSR000BNK.CTCFL.K-562 145 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 301 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 138 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 339 bp overlap
ChIP K562 ENCFF053BWO 171 bp overlap
ELF1 2 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 160 bp overlap
ChIP K562 ENCFF496AKI 250 bp overlap
EPAS1 1 dataset
ChIP 501-mel GSE95280.EPAS1.501-mel 363 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 304 bp overlap
ESR1 7 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 305 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 162 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 330 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 203 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 216 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 236 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 110 bp overlap
EZH2 2 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 338 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 213 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 363 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 119 bp overlap
GABPA 4 datasets
ChIP K-562 ENCSR290MUH.GABPA.K-562 340 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 186 bp overlap
ChIP K562 ENCFF139LXS 363 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 142 bp overlap
GABPB1 2 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 363 bp overlap
ChIP K562 ENCFF015GDS 363 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 347 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 205 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 207 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 160 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 363 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 109 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 112 bp overlap
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 314 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 275 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 272 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 328 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 363 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 363 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 64 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 94 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 207 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 256 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 127 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 242 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 227 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 292 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 281 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 207 bp overlap
ChIP H1 ENCFF967OJF 192 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 119 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 230 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 205 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 144 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 164 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 152 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 351 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 336 bp overlap
ChIP K562 ENCFF196WTG 310 bp overlap
ChIP K562 ENCFF967GRF 299 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 137 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 363 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 363 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 203 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 292 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 105 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 299 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 294 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 128 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 356 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 332 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 339 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 161 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 166 bp overlap
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 174 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 67 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 292 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-DMSO GSE128673.TP53.Calu-1_MUT8-DMSO 122 bp overlap
TP63 2 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 139 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 145 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 246 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 189 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 363 bp overlap
YY1 9 datasets
ChIP GM12878 ENCFF908JTL 320 bp overlap
ChIP H1 ENCFF524BTL 283 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 261 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 157 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 194 bp overlap
ChIP K562 ENCFF199FNC 284 bp overlap
ChIP K562 ENCFF660QRE 147 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 296 bp overlap
ChIP WA01 GSE39096.YY1.WA01 167 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 363 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 363 bp overlap
ZNF30 1 dataset
ChIP HEK293T GSE78099.ZNF30.HEK293T 199 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 310 bp overlap
ChIP K562 ENCFF281INV 351 bp overlap