chr11 : 131,640,372 – 131,640,890

518 bp 90 TFs 0 linked genes

This 518 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

90 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap

Alx1 1 dataset

Motif DE_12h DE_12h-Alx1_MA0854.2 8 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 202 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 173 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 342 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

DUXA 2 datasets

Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap

Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 302 bp overlap

ERF::NHLH1 1 dataset

Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap

ETV1 2 datasets

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

EZH2 1 dataset

ChIP A-1847 GSE95643.EZH2.A-1847 113 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 267 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HNF4A 2 datasets

Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap

Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB4 2 datasets

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap

HOXC4 2 datasets

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap

HOXD3 2 datasets

Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap

Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap

HOXD4 2 datasets

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap

Hmx1 1 dataset

Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap

Hmx2 1 dataset

Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 269 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 280 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 509 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 353 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 484 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 314 bp overlap

NKX2-3 1 dataset

Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap

NR2C1 2 datasets

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap

NR2C2 2 datasets

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap

Nkx3-2 1 dataset

Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

Nr1H2 2 datasets

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 2 datasets

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 2 datasets

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap

PAX4 2 datasets

Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap

Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap

PHOX2A 2 datasets

Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 388 bp overlap

POU6F1 2 datasets

Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap

Motif DE_36h DE_36h-POU6F1_MA1549.2 7 bp overlap

POU6F2 2 datasets

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

PRDM1 2 datasets

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 296 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RORA 4 datasets

Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap

Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap

Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap

Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap

RORB 2 datasets

Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap

Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap

RORC 2 datasets

Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap

Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap

SCRT1 1 dataset

Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap

SCRT2 1 dataset

Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap

SIX2 5 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 368 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 309 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 340 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 283 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 192 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 400 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 385 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 258 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 362 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 274 bp overlap

SP1 2 datasets

ChIP WA01 ENCSR000BIR.SP1.WA01 254 bp overlap

ChIP WTC11 ENCFF688PEU 420 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

TBP 2 datasets

ChIP H1 ENCFF859IIO 377 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 179 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 329 bp overlap

THRA 2 datasets

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 178 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 292 bp overlap

ZNF263 1 dataset

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

ZNF384 2 datasets

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 234 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 188 bp overlap

ZNF547 2 datasets

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

ZNF770 2 datasets

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap