chr11 : 119,028,269 – 119,028,679
410 bp 68 TFs 4 linked genes
This 410 bp open chromatin element is linked to 4 target genes and is bound by 68 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC37A4 2.2 kb Proximal Proximity
ENSG00000283704 9.3 kb Proximal Proximity
TRAPPC4 9.5 kb Proximal Proximity
RPS25 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:119,023,269 – 119,033,679
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 304 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 339 bp overlap
ATF3 1 dataset
ChIP liver ENCFF867MFZ 174 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 294 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 389 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 133 bp overlap
EEA1 2 datasets
ChIP HepG2 ENCFF958VUU 205 bp overlap
ChIP HepG2 ENCFF958VUU 404 bp overlap
EGR1 1 dataset
ChIP liver ENCFF130MBW 134 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 256 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 274 bp overlap
GABPA 1 dataset
ChIP liver ENCFF500III 188 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 394 bp overlap
ChIP DE DE-GATA4-2 405 bp overlap
ChIP foregut GSE117136.GATA4.foregut 242 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 373 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 322 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 363 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 376 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 384 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 387 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 361 bp overlap
ChIP foregut GSE117136.GATA6.foregut 286 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 298 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 66 bp overlap
HES4 1 dataset
ChIP HepG2 ENCFF200ZII 250 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 76 bp overlap
ChIP liver ERP002306.HNF4A.liver 118 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 103 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 194 bp overlap
JUND 1 dataset
ChIP liver ENCFF007WWT 97 bp overlap
MAX 4 datasets
ChIP Ishikawa ENCFF064TDQ 133 bp overlap
ChIP liver ENCFF092GVW 106 bp overlap
ChIP liver ENCFF584QGB 66 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 106 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 296 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 296 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 182 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 267 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 333 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 126 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 162 bp overlap
NR0B2 1 dataset
ChIP HepG2 ENCFF071MVY 170 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 207 bp overlap
ChIP liver ENCFF427MRU 86 bp overlap
POLR2A 3 datasets
ChIP gastrocnemius medialis ENCFF081DTE 160 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 151 bp overlap
ChIP right lobe of liver ENCFF026NCK 140 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 402 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 120 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 92 bp overlap
PRDM10 4 datasets
ChIP HEK293 ENCFF145WQQ 365 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 300 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 226 bp overlap
ChIP K562 ENCFF740YLK 256 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 109 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF967GRF 208 bp overlap
RELA 3 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 79 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 70 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 86 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 136 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 197 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 77 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 346 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 306 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 344 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 410 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 184 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 179 bp overlap
SP1 2 datasets
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 104 bp overlap
ChIP liver ENCFF597LFJ 73 bp overlap
SPEN 1 dataset
ChIP HepG2 ENCFF939VPY 167 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 263 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 226 bp overlap
TAF1 3 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 147 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 107 bp overlap
ChIP liver ENCSR016BMM.TAF1.liver 75 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 410 bp overlap
U2AF1 2 datasets
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 221 bp overlap
ChIP Hep-G2 ENCSR868JLS.U2AF1.Hep-G2 182 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 146 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 390 bp overlap
ChIP liver ENCFF400MBC 194 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 54 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 185 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 410 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 410 bp overlap
ZBTB7B 1 dataset
ChIP HepG2 ENCFF763OCV 202 bp overlap
ZFP91 2 datasets
ChIP HepG2 ENCFF012CME 403 bp overlap
ChIP HepG2 ENCFF012CME 69 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 382 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 146 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 376 bp overlap
ZNF143 1 dataset
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 142 bp overlap
ZNF263 1 dataset
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 140 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 141 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 131 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 345 bp overlap
ZNF546 2 datasets
ChIP HepG2 ENCFF996NZA 333 bp overlap
ChIP HepG2 ENCFF996NZA 410 bp overlap
ZNF550 1 dataset
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 410 bp overlap
ZNF572 1 dataset
ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 205 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 272 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 410 bp overlap
ZSCAN21 1 dataset
ChIP HepG2 ENCFF676MFO 238 bp overlap
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