chr11 : 96,614,728 – 96,615,353
625 bp 93 TFs 0 linked genes
This 625 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:96,609,728 – 96,620,353
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 281 bp overlap
ASCL1 5 datasets
Motif DE_48h DE_48h-ASCL1_MA1100.3 8 bp overlap
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 113 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 343 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 188 bp overlap
Ascl2 1 dataset
Motif DE_48h DE_48h-Ascl2_MA0816.1 10 bp overlap
Atoh1 1 dataset
Motif DE_48h DE_48h-Atoh1_MA1467.3 7 bp overlap
BHLHE22 2 datasets
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
BRD4 9 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 200 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 390 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 275 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 434 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 367 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 312 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 445 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 268 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 141 bp overlap
Bhlha15 1 dataset
Motif DE_48h DE_48h-Bhlha15_MA1472.3 8 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 234 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 475 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 57 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 102 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 264 bp overlap
ChIP BLaER1 ENCFF460KDD 426 bp overlap
ERF::FOXO1 1 dataset
Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap
ERF::NHLH1 2 datasets
Motif DE_48h DE_48h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_48h DE_48h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 1 dataset
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 215 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 565 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 60 bp overlap
FLI1 1 dataset
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 181 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 264 bp overlap
FOXE1 1 dataset
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 284 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 241 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_48h DE_48h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP2 1 dataset
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 162 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 401 bp overlap
ChIP DE DE-GATA4-2 621 bp overlap
ChIP foregut GSE117136.GATA4.foregut 432 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 400 bp overlap
ChIP DE DE-GATA6-2 487 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 531 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 445 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 533 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 323 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 561 bp overlap
ChIP foregut GSE117136.GATA6.foregut 412 bp overlap
HAND2 3 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 149 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 424 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 459 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 485 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 456 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 141 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 400 bp overlap
Irf1 3 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
KLF16 1 dataset
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 371 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 395 bp overlap
MED1 2 datasets
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 240 bp overlap
ChIP RH4 GSE83726.MED1.RH4 265 bp overlap
MSC 1 dataset
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 381 bp overlap
MYC 3 datasets
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 294 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 311 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 226 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 368 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 391 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 257 bp overlap
MYF5 2 datasets
Motif DE_48h DE_48h-MYF5_MA1641.2 8 bp overlap
ChIP Rh18 GSE84628.MYF5.Rh18 257 bp overlap
MYOD1 6 datasets
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 524 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 464 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 330 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 188 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 214 bp overlap
MYOG 4 datasets
Motif DE_48h DE_48h-MYOG_MA0500.3 8 bp overlap
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 373 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 311 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 225 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 369 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 497 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 363 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 379 bp overlap
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
ChIP NCI-H524 GSE69394.NEUROD1.NCI-H524 127 bp overlap
NEUROG2 1 dataset
Motif DE_48h DE_48h-NEUROG2_MA1642.2 7 bp overlap
NHLH1 1 dataset
Motif DE_48h DE_48h-NHLH1_MA0048.3 9 bp overlap
NR1D1 2 datasets
Motif DE_48h DE_48h-NR1D1_MA1531.2 14 bp overlap
Motif DE_72h DE_72h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap
Motif DE_72h DE_72h-NR1D2_MA1532.2 15 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
Neurod2 3 datasets
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 428 bp overlap
PBX3 2 datasets
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
Ptf1A 2 datasets
Motif DE_48h DE_48h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 318 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 371 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 293 bp overlap
Rhox11 1 dataset
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 515 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 435 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 398 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 290 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 140 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 200 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 625 bp overlap
SOX21 3 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap
Motif DE_72h DE_72h-SOX21_MA0866.1 15 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 292 bp overlap
SP3 1 dataset
Motif DE_48h DE_48h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_48h DE_48h-SP8_MA0747.2 11 bp overlap
Sox1 3 datasets
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Motif DE_48h DE_48h-Sox1_MA0870.1 15 bp overlap
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 291 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 174 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 340 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 243 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 243 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap
THAP1 1 dataset
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 211 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 329 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 335 bp overlap
Tcf12 2 datasets
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_48h DE_48h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
VEZF1 1 dataset
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 374 bp overlap
ZBTB12 3 datasets
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
Motif DE_48h DE_48h-ZBTB12_MA1649.2 7 bp overlap
Motif DE_72h DE_72h-ZBTB12_MA1649.2 7 bp overlap
ZFP42 1 dataset
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
ZNF148 1 dataset
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ZNF282 1 dataset
Motif DE_48h DE_48h-ZNF282_MA1154.2 15 bp overlap
ZNF343 1 dataset
Motif DE_48h DE_48h-ZNF343_MA1711.2 16 bp overlap
ZNF384 1 dataset
Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap
ZNF549 1 dataset
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
ZNF93 1 dataset
Motif DE_48h DE_48h-ZNF93_MA1721.2 14 bp overlap
ZSCAN16 1 dataset
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap
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