chr11 : 35,402,638 35,403,312
674 bp 55 TFs 5 linked genes
This 674 bp open chromatin element is linked to 5 target genes and is bound by 55 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
SLC1A2 1.2 kb Proximal Proximity
TRIM44 259.8 kb Distal Multiome
PDHX 486.3 kb Distal Multiome+HiCAR
APIP 486.6 kb Distal Multiome+HiCAR
PRR5L 973.4 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:35,397,638 – 35,408,312
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 621 bp overlap
ASCL1 1 dataset
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 161 bp overlap
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 674 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 244 bp overlap
CREM 1 dataset
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 244 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 426 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 305 bp overlap
ChIP HepG2 ENCFF354ACD 325 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 58 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 291 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 291 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 113 bp overlap
ESRRA 7 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 449 bp overlap
ChIP BT-474_AICAR GSE75876.ESRRA.BT-474_AICAR 98 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 284 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 368 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 204 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 114 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 88 bp overlap
FOXA1 4 datasets
ChIP HepG2 ENCFF207NVJ 86 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 407 bp overlap
FOXA2 6 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 231 bp overlap
ChIP DE DE-FOXA2-1 674 bp overlap
ChIP DE DE-FOXA2-2 674 bp overlap
ChIP HepG2 ENCFF533COJ 85 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 410 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 371 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 674 bp overlap
ChIP DE DE-GATA4-2 674 bp overlap
ChIP Hep-G2 ENCSR590CNM.GATA4.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF309FOQ 397 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 203 bp overlap
ChIP foregut GSE117136.GATA4.foregut 462 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 643 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 674 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 328 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 304 bp overlap
ChIP DE DE-GATA6-1 674 bp overlap
ChIP DE DE-GATA6-2 674 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 635 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 674 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 674 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 645 bp overlap
ChIP H9 ERP004206.GATA6.H9 203 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 674 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 663 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 252 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 360 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 573 bp overlap
ChIP foregut GSE117136.GATA6.foregut 446 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 541 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 526 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 553 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 192 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 128 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 263 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 271 bp overlap
HNF4A 2 datasets
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 125 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
ISL2 2 datasets
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 253 bp overlap
ChIP HepG2 ENCFF742RIP 471 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 309 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 347 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 280 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 393 bp overlap
KDM1A 11 datasets
ChIP HepG2 ENCFF240UWG 380 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 178 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 151 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 206 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 182 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 197 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 152 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 198 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 443 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 501 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 486 bp overlap
KLF5 1 dataset
ChIP HCC95 GSE88976.KLF5.HCC95 360 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 163 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 302 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 197 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 300 bp overlap
ONECUT2 1 dataset
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 160 bp overlap
PAXIP1 3 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 262 bp overlap
ChIP HepG2 ENCFF526NOJ 551 bp overlap
ChIP HepG2 ENCFF526NOJ 434 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 311 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 483 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF675RCN 574 bp overlap
ChIP stomach ENCFF607ZPU 130 bp overlap
ChIP stomach ENCFF820WZN 171 bp overlap
PRDM15 1 dataset
ChIP HepG2 ENCFF259LUZ 447 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 520 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 280 bp overlap
ChIP K562 ENCFF248CGR 133 bp overlap
ChIP K562 ENCFF957ORK 133 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 134 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 281 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 674 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 674 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 674 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 578 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 674 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 605 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 674 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 581 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 196 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 584 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 437 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 546 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 414 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF7 2 datasets
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 300 bp overlap
ChIP HepG2 ENCFF628OFQ 139 bp overlap
TCF7L2 2 datasets
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 388 bp overlap
ChIP HepG2 ENCFF510OLG 451 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 397 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 209 bp overlap
ChIP K562 ENCFF255RZG 212 bp overlap
ZMYM3 6 datasets
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 116 bp overlap
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 141 bp overlap
ChIP HepG2 ENCFF408KTI 216 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 249 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 220 bp overlap
ChIP K562 ENCFF361LXT 258 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 674 bp overlap
ZNF768 3 datasets
ChIP HEK293 ENCFF579QSI 245 bp overlap
ChIP HEK293 ENCSR070HWF.ZNF768.HEK293 200 bp overlap
ChIP HepG2 ENCFF388QCK 156 bp overlap