chr11:1,568,160–1,568,834

chr11 : 1,568,160 – 1,568,834

674 bp 58 TFs 6 linked genes

This 674 bp open chromatin element is linked to 6 target genes and is bound by 58 transcription factors.

Linked Genes

6 genes

Gene	Expression	Dist. to TSS	Distance	Link type
DUSP8		3.4 kb	Proximal	Proximity
KRTAP5-AS1		3.9 kb	Proximal	Proximity
MOB2		67.3 kb	Distal	Multiome
BRSK2		178.2 kb	Distal	Multiome
CTSD		195.4 kb	Distal	Multiome
TOLLIP		258.9 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 369 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 255 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 157 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 269 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 617 bp overlap

BMI1 2 datasets

ChIP GM12878 ENCSR469WII.BMI1.GM12878 430 bp overlap

ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 345 bp overlap

BRD4 4 datasets

ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 197 bp overlap

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 159 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 485 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 193 bp overlap

COMMD3-BMI1,BMI1 2 datasets

ChIP GM12878 ENCFF249AMT 251 bp overlap

ChIP MCF-7 ENCFF570JPP 391 bp overlap

ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 58 bp overlap

DNMT3B 1 dataset

ChIP HUES-8 GSE99346.DNMT3B.HUES-8 246 bp overlap

ChIP Ishikawa ENCSR000BSQ.EGR1.Ishikawa 111 bp overlap

EP300 3 datasets

ChIP WA01 ENCSR000AUQ.EP300.WA01 132 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 476 bp overlap

ChIP neural cell ENCFF442QNK 517 bp overlap

ESR1 18 datasets

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 427 bp overlap

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 295 bp overlap

ChIP Ishikawa ENCSR000BIZ.ESR1.Ishikawa 235 bp overlap

ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 219 bp overlap

ChIP Ishikawa GSE109891.ESR1.Ishikawa 275 bp overlap

ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 303 bp overlap

ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 321 bp overlap

ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 269 bp overlap

ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 331 bp overlap

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 212 bp overlap

ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 247 bp overlap

ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 207 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 347 bp overlap

ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 152 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 285 bp overlap

ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 265 bp overlap

ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 320 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 361 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 441 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 256 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 322 bp overlap

GABPA 1 dataset

ChIP WA01 ENCSR000BIW.GABPA.WA01 129 bp overlap

GLIS2 2 datasets

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 166 bp overlap

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 244 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 157 bp overlap

HDAC1 1 dataset

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 272 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 196 bp overlap

ChIP HEK293 ENCSR803GYT.HIC1.HEK293 429 bp overlap

HNRNPL 2 datasets

ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 392 bp overlap

ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 301 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 394 bp overlap

ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 259 bp overlap

KMT2A 1 dataset

ChIP blood_cord GSE83671.KMT2A.blood_cord 334 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 167 bp overlap

MXI1 6 datasets

ChIP GM12878 ENCFF666NJR 431 bp overlap

ChIP H1 ENCFF963FZS 337 bp overlap

ChIP WA01 ENCSR000EBR.MXI1.WA01 184 bp overlap

ChIP neural ENCSR934NHU.MXI1.neural 539 bp overlap

ChIP neural cell ENCFF623HQN 171 bp overlap

ChIP neural cell ENCFF623HQN 377 bp overlap

ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 179 bp overlap

MYNN 5 datasets

ChIP HEK293 ENCFF897QZG 253 bp overlap

ChIP HEK293 ENCSR707BNG.MYNN.HEK293 474 bp overlap

ChIP HEK293 GSE76494.MYNN.HEK293 197 bp overlap

ChIP K-562 ENCSR737LTZ.MYNN.K-562 247 bp overlap

ChIP K562 ENCFF399UNK 365 bp overlap

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 218 bp overlap

PATZ1 1 dataset

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 389 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 342 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 189 bp overlap

POU2F1 1 dataset

ChIP T-47D GSE148277.POU2F1.T-47D 220 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 501 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 502 bp overlap

RBBP5 2 datasets

ChIP WA01 ENCSR000AQC.RBBP5.WA01 160 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 221 bp overlap

RBFOX2 2 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 651 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 434 bp overlap

ChIP neural ENCSR000BTV.REST.neural 233 bp overlap

RFX1 9 datasets

ChIP HepG2 ENCFF144SCF 437 bp overlap

ChIP K-562 ENCSR968GIB.RFX1.K-562 521 bp overlap

ChIP K-562 ENCSR041AXL.RFX1.K-562 518 bp overlap

ChIP K562 ENCFF421AVO 568 bp overlap

ChIP K562 ENCFF809XVG 485 bp overlap

ChIP MCF-7 ENCFF782EZS 404 bp overlap

ChIP MCF-7 ENCFF973QAD 344 bp overlap

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 489 bp overlap

ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 476 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 245 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 473 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 220 bp overlap

SIN3A 2 datasets

ChIP H1 ENCFF042ZSL 521 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 333 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 306 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 496 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 465 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 379 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 409 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 313 bp overlap

SMARCA4 2 datasets

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 238 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 146 bp overlap

SMARCC1 3 datasets

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 193 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 623 bp overlap

ChIP K562 ENCFF088XXV 183 bp overlap

SUPT5H 1 dataset

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 192 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 414 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 316 bp overlap

ChIP breast-organoid GSE113909.TP63.breast-organoid 172 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 180 bp overlap

ChIP GM12878 ENCSR000BND.ZEB1.GM12878 125 bp overlap

ZIC2 2 datasets

ChIP HEK293 ENCFF033NQQ 334 bp overlap

ChIP HEK293 ENCFF033NQQ 134 bp overlap

ZNF341 2 datasets

ChIP HEK293 ENCFF944VMC 325 bp overlap

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 479 bp overlap

ZNF394 1 dataset

ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 364 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 277 bp overlap