chr10 : 120,459,159 120,459,699
540 bp 73 TFs 1 linked gene
This 540 bp open chromatin element is linked to PLPP4 and is bound by 73 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLPP4 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:120,454,159 – 120,464,699
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 12 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 125 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 130 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 344 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 197 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 285 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 343 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 317 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 154 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 149 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 230 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 220 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 286 bp overlap
BCL11A 14 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 104 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 204 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 193 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 106 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 78 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 58 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 68 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 92 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 100 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 68 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 195 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 279 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 313 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 430 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 437 bp overlap
BRD4 5 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 303 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 305 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 142 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 304 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 210 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 391 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 437 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 232 bp overlap
ChIP K562 ENCFF673OEZ 354 bp overlap
CEBPB 2 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 115 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 120 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 308 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 287 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 314 bp overlap
ChIP K562 ENCFF403WPG 497 bp overlap
CTCF 26 datasets
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 172 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 161 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 282 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 163 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 121 bp overlap
ChIP SK-N-SH ENCFF575DMG 411 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 326 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 119 bp overlap
ChIP VCaP ENCFF858YQT 540 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 391 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 377 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 501 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 167 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 469 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 339 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 457 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 499 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 388 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 403 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 428 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 415 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 415 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 459 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 160 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
CTCFL 3 datasets
ChIP FT282 GSE131931.CTCFL.FT282 313 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 191 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 172 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 389 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 322 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 153 bp overlap
EZH2 4 datasets
ChIP A673 ENCFF790MVL 95 bp overlap
ChIP hepatocyte ENCFF552DZB 509 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 392 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 250 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 269 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 442 bp overlap
ChIP DE DE-FOXA2-2 339 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 229 bp overlap
GATA1 14 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 346 bp overlap
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 180 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 400 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 317 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 387 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 330 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 323 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 342 bp overlap
ChIP erythroblast ENCFF867JAR 302 bp overlap
ChIP erythroblast ENCFF867JAR 222 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 540 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 371 bp overlap
ChIP erythroid_Don002 GSE137982.GATA1.erythroid_Don002 245 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 303 bp overlap
GATA2 11 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 344 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 288 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 283 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 276 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 486 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 381 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 447 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 253 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 205 bp overlap
ChIP SH-SY5Y ENCFF475HYF 466 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 255 bp overlap
ChIP SK-N-SH ENCFF040SSB 195 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 499 bp overlap
ChIP DE DE-GATA4-2 540 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 309 bp overlap
ChIP foregut GSE117136.GATA4.foregut 155 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 509 bp overlap
ChIP DE DE-GATA6-2 540 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 476 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 540 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 540 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 540 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 540 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 540 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 536 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 196 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 206 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 424 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 256 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 405 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 158 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 288 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 394 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 235 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 236 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 396 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 407 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 200 bp overlap
ChIP SK-N-SH ENCFF285LXR 411 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 139 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR113LAS.MTA2.K-562 281 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 344 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 240 bp overlap
ChIP K562 ENCFF788MPU 372 bp overlap
ChIP K562 ENCFF788MPU 387 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 176 bp overlap
NFIC 3 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 379 bp overlap
ChIP K562 ENCFF167YID 387 bp overlap
ChIP K562 ENCFF167YID 411 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 340 bp overlap
NR3C1 9 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 387 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 392 bp overlap
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 119 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 359 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 86 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 340 bp overlap
ChIP U2OS_SHNS GSE65847.NR3C1.U2OS_SHNS 200 bp overlap
ChIP U2OS_siHic5siNS GSE109383.NR3C1.U2OS_siHic5siNS 204 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 353 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 298 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 426 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 291 bp overlap
RAD21 3 datasets
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 199 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 210 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 428 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 248 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 540 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 540 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 535 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 520 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 540 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 458 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 540 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 540 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 243 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 229 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 504 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 301 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 511 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 268 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 235 bp overlap
TAL1 15 datasets
ChIP CD34 GSE52924.TAL1.CD34 379 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 296 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 414 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 349 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 360 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 251 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 342 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 386 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 343 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 393 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 322 bp overlap
ChIP K562 ENCFF620GMX 111 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 355 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 188 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 331 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 246 bp overlap
ChIP K562 ENCFF931DJY 185 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 328 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 391 bp overlap
ChIP K562 ENCFF673NIK 320 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 167 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 391 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE15780.TP53.SaOS-2 153 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 449 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR957LDM.TRIM24.K-562 262 bp overlap
ChIP K-562 ENCSR907MZR.TRIM24.K-562 228 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 147 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 147 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 540 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 250 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 540 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 160 bp overlap