chr1 : 192,630,573 192,631,021
448 bp 75 TFs 0 linked genes
This 448 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:192,625,573 – 192,636,021
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AR 10 datasets
ChIP LNCaP GSE110655.AR.LNCaP 59 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 65 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 173 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 71 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 86 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 85 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 210 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 144 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 126 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 59 bp overlap
ARID3A 2 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 163 bp overlap
ChIP HepG2 ENCFF341DES 202 bp overlap
ATF3 2 datasets
ChIP liver ENCFF867MFZ 346 bp overlap
ChIP liver ENCFF867MFZ 146 bp overlap
Atf3 1 dataset
Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 405 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 340 bp overlap
BARX1 1 dataset
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BATF 1 dataset
Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 150 bp overlap
BNC2 1 dataset
Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap
BRD4 10 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 82 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 448 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 401 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 227 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 353 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 339 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 448 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 407 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 418 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 448 bp overlap
BSX 1 dataset
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 121 bp overlap
CREBBP 3 datasets
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 146 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 149 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 331 bp overlap
DLX1 1 dataset
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 188 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 142 bp overlap
ERG 2 datasets
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 225 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 156 bp overlap
FOXA1 35 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 312 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 55 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 54 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 57 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 53 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 75 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 84 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 95 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 184 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 304 bp overlap
ChIP HepG2 ENCFF740VZW 54 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 107 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 59 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 192 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 57 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 109 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 264 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 92 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 54 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 79 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 266 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 122 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 261 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 115 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 184 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 193 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 196 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 93 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 93 bp overlap
ChIP liver ENCFF537QZV 107 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 85 bp overlap
ChIP primary-prostate-cancer_P1_DSG GSE114737.FOXA1.primary-prostate-cancer_P1_DSG 65 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 116 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 82 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 222 bp overlap
FOXA2 9 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 129 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 92 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 191 bp overlap
ChIP DE DE-FOXA2-1 448 bp overlap
ChIP DE DE-FOXA2-2 448 bp overlap
ChIP liver ENCFF877SFI 74 bp overlap
ChIP liver ENCFF888VJF 120 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 190 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 63 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 125 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 267 bp overlap
GATA2 1 dataset
ChIP VCaP GSE125236.GATA2.VCaP 153 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 263 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 186 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 422 bp overlap
ChIP DE DE-GATA4-2 442 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 309 bp overlap
ChIP foregut GSE117136.GATA4.foregut 414 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 448 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 354 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 334 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 448 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 256 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 228 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 345 bp overlap
ChIP foregut GSE117136.GATA6.foregut 352 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 362 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 376 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 326 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 153 bp overlap
GBX2 1 dataset
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 146 bp overlap
ChIP LNCaP GSE80256.GRHL2.LNCaP 219 bp overlap
HESX1 1 dataset
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
HOXB13 10 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 103 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 64 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 150 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 86 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 183 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 108 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 61 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 71 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 128 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 78 bp overlap
Hmx2 1 dataset
Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 196 bp overlap
JUND 2 datasets
ChIP liver ENCFF557PGE 442 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 189 bp overlap
Jun 1 dataset
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 224 bp overlap
LBX2 1 dataset
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
MAFK 1 dataset
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 261 bp overlap
MSX1 1 dataset
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 367 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 295 bp overlap
Mafg 1 dataset
Motif DE_48h DE_48h-Mafg_MA0659.4 12 bp overlap
Msx3 1 dataset
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 292 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 345 bp overlap
ChIP HepG2 ENCFF243FIR 56 bp overlap
ChIP liver ERP002306.ONECUT1.liver 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 381 bp overlap
ONECUT2 2 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 448 bp overlap
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 81 bp overlap
PHOX2B 1 dataset
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 67 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 301 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 182 bp overlap
ChIP liver ENCFF522JHE 381 bp overlap
RAX 1 dataset
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 433 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 189 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 307 bp overlap
SMARCA4 1 dataset
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 332 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 375 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 68 bp overlap
YY1 2 datasets
ChIP liver ENCFF400MBC 404 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 127 bp overlap
ZBTB33 3 datasets
ChIP liver ENCFF592BJA 448 bp overlap
ChIP liver ENCFF592BJA 214 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 231 bp overlap
ZNF214 2 datasets
Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap
Motif DE_72h DE_72h-ZNF214_MA1975.2 13 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 268 bp overlap
ChIP HepG2 ENCFF331VPZ 306 bp overlap