chr10 : 93,274,526 93,274,948
422 bp 85 TFs 1 linked gene
This 422 bp open chromatin element is linked to RPL17P34 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RPL17P34 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:93,269,526 – 93,279,948
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 304 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 393 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 422 bp overlap
CDX2 1 dataset
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 245 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 123 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 174 bp overlap
DDX20 2 datasets
ChIP K-562 ENCSR382AIB.DDX20.K-562 173 bp overlap
ChIP K562 ENCFF373BEC 257 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 412 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 385 bp overlap
ESR1 9 datasets
Motif DE_24h DE_24h-ESR1_MA0112.4 15 bp overlap
Motif DE_36h DE_36h-ESR1_MA0112.4 15 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 231 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 178 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 162 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 409 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 394 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 394 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 293 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 190 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 174 bp overlap
ESR2 3 datasets
Motif DE_24h DE_24h-ESR2_MA0258.2 15 bp overlap
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 327 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 288 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 197 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 243 bp overlap
ChIP DE DE-FOXA2-1 420 bp overlap
GATA2 3 datasets
Motif DE_24h DE_24h-GATA2_MA0036.4 7 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 151 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 296 bp overlap
GATA4 9 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 296 bp overlap
ChIP DE DE-GATA4-1 422 bp overlap
ChIP DE DE-GATA4-2 422 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 280 bp overlap
ChIP foregut GSE117136.GATA4.foregut 408 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 422 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 332 bp overlap
GATA5 2 datasets
Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 233 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 297 bp overlap
ChIP DE DE-GATA6-1 413 bp overlap
ChIP DE DE-GATA6-2 422 bp overlap
Motif DE_24h DE_24h-GATA6_MA1104.3 8 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 422 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 422 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 422 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 422 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 422 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap
ChIP foregut GSE117136.GATA6.foregut 385 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 419 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 363 bp overlap
GRHL2 1 dataset
ChIP WTC11 ENCFF105GQI 185 bp overlap
Gata3 2 datasets
Motif DE_24h DE_24h-Gata3_MA0037.5 8 bp overlap
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 114 bp overlap
HOXA9 2 datasets
Motif DE_24h DE_24h-HOXA9_MA0594.3 7 bp overlap
Motif DE_36h DE_36h-HOXA9_MA0594.3 7 bp overlap
HOXB9 2 datasets
Motif DE_24h DE_24h-HOXB9_MA1503.2 9 bp overlap
Motif DE_36h DE_36h-HOXB9_MA1503.2 9 bp overlap
HOXC10 2 datasets
Motif DE_24h DE_24h-HOXC10_MA0905.2 9 bp overlap
Motif DE_36h DE_36h-HOXC10_MA0905.2 9 bp overlap
HOXC11 2 datasets
Motif DE_24h DE_24h-HOXC11_MA0651.3 11 bp overlap
Motif DE_36h DE_36h-HOXC11_MA0651.3 11 bp overlap
HOXC12 2 datasets
Motif DE_24h DE_24h-HOXC12_MA0906.2 10 bp overlap
Motif DE_36h DE_36h-HOXC12_MA0906.2 10 bp overlap
HOXC9 2 datasets
Motif DE_24h DE_24h-HOXC9_MA0485.3 9 bp overlap
Motif DE_36h DE_36h-HOXC9_MA0485.3 9 bp overlap
HOXD10 2 datasets
Motif DE_24h DE_24h-HOXD10_MA1506.2 10 bp overlap
Motif DE_36h DE_36h-HOXD10_MA1506.2 10 bp overlap
HOXD11 2 datasets
Motif DE_24h DE_24h-HOXD11_MA0908.2 9 bp overlap
Motif DE_36h DE_36h-HOXD11_MA0908.2 9 bp overlap
HOXD12 2 datasets
Motif DE_24h DE_24h-HOXD12_MA0873.2 10 bp overlap
Motif DE_36h DE_36h-HOXD12_MA0873.2 10 bp overlap
Hoxa11 2 datasets
Motif DE_24h DE_24h-Hoxa11_MA0911.2 9 bp overlap
Motif DE_36h DE_36h-Hoxa11_MA0911.2 9 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 195 bp overlap
IRF1 2 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 391 bp overlap
ChIP K562 ENCFF277KTJ 319 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 400 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 363 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 399 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 422 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 91 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 349 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 203 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 147 bp overlap
MXD4 1 dataset
ChIP WTC11 ENCFF044PLT 169 bp overlap
Mafb 2 datasets
Motif DE_24h DE_24h-Mafb_MA0117.3 11 bp overlap
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Mecom 2 datasets
Motif DE_24h DE_24h-Mecom_MA0029.2 11 bp overlap
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
NFIB 1 dataset
Motif DE_24h DE_24h-NFIB_MA1643.2 17 bp overlap
NFXL1 1 dataset
ChIP K562 ENCFF898RYR 218 bp overlap
NR2C1 4 datasets
Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 190 bp overlap
ChIP K562 ENCFF568JLK 297 bp overlap
NR2C2 3 datasets
Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
ChIP K562 ENCFF750AXF 422 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 191 bp overlap
ChIP K562 ENCFF998LHF 242 bp overlap
Nfe2l2 1 dataset
Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap
Nr1H2 2 datasets
Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 221 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 414 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 259 bp overlap
PTTG1 2 datasets
ChIP K-562 ENCSR314BBS.PTTG1.K-562 192 bp overlap
ChIP K562 ENCFF017KRM 207 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 184 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 342 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 422 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 422 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 422 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 401 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 422 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 422 bp overlap
SMAD3 1 dataset
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 189 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 386 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 413 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 420 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 226 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 221 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 181 bp overlap
ChIP K562 ENCFF465AQA 240 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 111 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 193 bp overlap
TRPS1 2 datasets
Motif DE_24h DE_24h-TRPS1_MA1970.2 8 bp overlap
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 293 bp overlap
Yy1 1 dataset
Motif DE_24h DE_24h-Yy1_MA0095.4 8 bp overlap
ZBTB9 1 dataset
ChIP K562 ENCFF233EFX 206 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR117WTM.ZNF24.K-562 116 bp overlap
ChIP K562 ENCFF497GLV 222 bp overlap
ZNF257 1 dataset
ChIP K562 ENCFF849YZP 205 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 245 bp overlap
ZNF331 2 datasets
ChIP GM23338 ENCFF410NSZ 163 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 155 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 422 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 221 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 224 bp overlap
ZNF449 1 dataset
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 233 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 375 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 175 bp overlap
Zic1::Zic2 3 datasets
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 3 datasets
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Zic3 3 datasets
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap