chr10 : 19,415,978 – 19,417,110
1,132 bp 97 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 97 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:19,410,978 – 19,422,110
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 169 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 255 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 141 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 354 bp overlap
Alx4 1 dataset
Motif DE_60h DE_60h-Alx4_MA0853.2 12 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
Arx 1 dataset
Motif DE_60h DE_60h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 156 bp overlap
BSX 1 dataset
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
Bcl11B 2 datasets
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 251 bp overlap
DLX1 1 dataset
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
DMRTA2 1 dataset
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Dlx3 1 dataset
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
EBF1 3 datasets
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
EBF3 3 datasets
Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap
Motif DE_48h DE_48h-EBF3_MA1637.2 9 bp overlap
Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap
EN2 1 dataset
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 289 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 388 bp overlap
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 150 bp overlap
Ebf2 3 datasets
Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap
Motif DE_48h DE_48h-Ebf2_MA1604.2 9 bp overlap
Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap
Ebf4 3 datasets
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA1 10 datasets
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 213 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 224 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 210 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 153 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 105 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 250 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 271 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 236 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 199 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 688 bp overlap
ChIP DE DE-FOXA2-2 580 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
GATA1::TAL1 3 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 5 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 137 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 137 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 64 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 255 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 192 bp overlap
GATA3 6 datasets
ChIP Kelly GSE65664.GATA3.Kelly 225 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 117 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 89 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 92 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 67 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 267 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 171 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 183 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 621 bp overlap
ChIP DE DE-GATA4-2 825 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 253 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 510 bp overlap
ChIP DE DE-GATA6-2 902 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 702 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 362 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 575 bp overlap
GBX1 1 dataset
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Gfi1B 3 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HESX1 1 dataset
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
HOXB13 3 datasets
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 247 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 201 bp overlap
Hmx1 1 dataset
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 228 bp overlap
LBX1 1 dataset
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
MAFF 3 datasets
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
MEIS2 3 datasets
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
Motif DE_48h DE_48h-MEIS2_MA1640.2 9 bp overlap
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
MSX1 1 dataset
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MYB 2 datasets
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 155 bp overlap
Mafb 3 datasets
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
Msx3 1 dataset
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 258 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 662 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 589 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 217 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 789 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 637 bp overlap
ChIP hESC GSE18292.NANOG.hESC 132 bp overlap
ChIP hESC GSE20650.NANOG.hESC 242 bp overlap
NFATC3 3 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 96 bp overlap
NFIA 1 dataset
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NRL 3 datasets
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Nanog 3 datasets
Motif DE_36h DE_36h-Nanog_MA2339.1 7 bp overlap
Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap
Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap
Nfatc1 3 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nobox 1 dataset
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap
ONECUT3 3 datasets
Motif DE_36h DE_36h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_48h DE_48h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
PBX2 3 datasets
Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap
Motif DE_48h DE_48h-PBX2_MA1113.3 9 bp overlap
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PGR 3 datasets
Motif DE_36h DE_36h-PGR_MA2327.1 9 bp overlap
Motif DE_48h DE_48h-PGR_MA2327.1 9 bp overlap
Motif DE_60h DE_60h-PGR_MA2327.1 9 bp overlap
POU3F3 3 datasets
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU5F1 8 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 644 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 275 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 308 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 252 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 541 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 370 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 172 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 196 bp overlap
PRRX2 1 dataset
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
RAX 1 dataset
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 337 bp overlap
RORB 2 datasets
Motif DE_48h DE_48h-RORB_MA1150.2 10 bp overlap
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 2 datasets
Motif DE_48h DE_48h-RORC_MA1151.2 10 bp overlap
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
Runx1 2 datasets
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 527 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 425 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 297 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 177 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 359 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 402 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 422 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 308 bp overlap
TFAP2E 3 datasets
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_48h DE_48h-TFAP2E_MA1569.2 9 bp overlap
Motif DE_60h DE_60h-TFAP2E_MA1569.2 9 bp overlap
Yy1 3 datasets
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap
ZNF143 3 datasets
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF189 2 datasets
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
ZNF24 3 datasets
Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap
Motif DE_48h DE_48h-ZNF24_MA1124.1 13 bp overlap
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
ZNF274 3 datasets
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF460 3 datasets
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF582 2 datasets
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
ZNF680 2 datasets
Motif DE_48h DE_48h-ZNF680_MA1729.2 11 bp overlap
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
ZNF768 2 datasets
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
ZNF770 3 datasets
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
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