chr8 : 124,465,779 124,466,060
281 bp 51 TFs 2 linked genes
This 281 bp open chromatin element is linked to RNF139-DT and RNF139 and is bound by 51 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RNF139-DT 8.5 kb Proximal Proximity
RNF139 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:124,460,779 – 124,471,060
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 281 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 156 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 118 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 263 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 221 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 192 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 150 bp overlap
CTCF 2 datasets
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
CTCFL 1 dataset
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EGR1 11 datasets
ChIP H1 ENCFF451BLH 190 bp overlap
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 189 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 169 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 273 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 265 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 208 bp overlap
ChIP K562 ENCFF006PJY 141 bp overlap
ChIP K562 ENCFF113OPQ 257 bp overlap
ChIP K562 ENCFF895KGN 278 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 206 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 170 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 281 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 158 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR000BMV.FOSL1.K-562 173 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 130 bp overlap
INSM1 1 dataset
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 244 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 281 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 281 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 158 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 281 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 281 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 274 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 249 bp overlap
ChIP H1 ENCFF468JZD 193 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 167 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 199 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 281 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 265 bp overlap
KLF10 2 datasets
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 2 datasets
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 212 bp overlap
KLF5 2 datasets
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 175 bp overlap
KLF7 2 datasets
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
MAZ 4 datasets
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 161 bp overlap
ChIP IMR-90 ENCFF682IKN 128 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 180 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 97 bp overlap
MYBL2 1 dataset
ChIP MCF-10A_ctrl GSE115787.MYBL2.MCF-10A_ctrl 167 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 281 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 262 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 185 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 110 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 148 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 213 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 175 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SP1 2 datasets
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 281 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
TEAD1 3 datasets
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 119 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 214 bp overlap
TEAD3 1 dataset
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 5 datasets
ChIP H1 ENCFF778PAX 145 bp overlap
ChIP Ishikawa ENCFF772OTG 243 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 161 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 171 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 212 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 207 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 190 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 281 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF530 1 dataset
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap