chr7 : 51,847,843 51,848,234
391 bp 59 TFs 0 linked genes
This 391 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:51,842,843 – 51,853,234
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 230 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 134 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 340 bp overlap
ATF4 3 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
BCL6B 2 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 170 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 275 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 173 bp overlap
CTCF 6 datasets
ChIP BL41 GSE31485.CTCF.BL41 93 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 350 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 160 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 307 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 110 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 206 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF335XTP 284 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 283 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 301 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 138 bp overlap
GATA6 1 dataset
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
GRHL2 2 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 270 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 188 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 135 bp overlap
HIF1A 2 datasets
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 121 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 227 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 114 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 112 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 117 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 205 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 75 bp overlap
KLF5 4 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
ChIP YCC-3 GSE51705.KLF5.YCC-3 124 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 147 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 146 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 316 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 308 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 82 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 278 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 175 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
RAD21 1 dataset
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 200 bp overlap
REST 64 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 127 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 206 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 196 bp overlap
ChIP GM12878 ENCFF943QPB 199 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 186 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 143 bp overlap
ChIP GM23338 ENCFF024TCL 203 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 257 bp overlap
ChIP GP5D GSE51234.REST.GP5D 391 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 338 bp overlap
ChIP H1 ENCFF203SWY 257 bp overlap
ChIP H1 ENCFF429RUE 231 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 118 bp overlap
ChIP HCT116 ENCFF929AYY 204 bp overlap
ChIP HEK293 ENCFF073DOT 187 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 256 bp overlap
ChIP HL-60 ENCFF589LOF 205 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 213 bp overlap
ChIP HeLa-S3 ENCFF911DTC 165 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 210 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 216 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 173 bp overlap
ChIP HepG2 ENCFF122AWR 144 bp overlap
ChIP Ishikawa ENCFF456OHV 193 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 223 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 316 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 173 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 169 bp overlap
ChIP K562 ENCFF430APM 199 bp overlap
ChIP K562 ENCFF688UKW 280 bp overlap
ChIP K562 ENCFF758CZL 348 bp overlap
ChIP MCF-7 ENCFF893RRD 247 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 328 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 126 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 150 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 193 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 238 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 248 bp overlap
ChIP PFSK-1 ENCFF668WMP 164 bp overlap
ChIP PFSK-1 ENCFF845VHA 209 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 353 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 221 bp overlap
ChIP Panc1 ENCFF338WSQ 204 bp overlap
ChIP Panc1 ENCFF518EEQ 312 bp overlap
ChIP Panc1 ENCFF629OJO 237 bp overlap
ChIP SK-N-SH ENCFF861MKH 204 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 168 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 333 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 391 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 208 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 373 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 391 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 391 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 391 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 260 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 216 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 248 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 255 bp overlap
ChIP liver ENCFF240FWT 330 bp overlap
ChIP liver ENCFF577AZT 342 bp overlap
ChIP liver ENCSR867WPH.REST.liver 197 bp overlap
ChIP liver ENCSR893QWP.REST.liver 201 bp overlap
SATB1 2 datasets
Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap
Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 106 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 157 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 224 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_48h DE_48h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 5 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 174 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 128 bp overlap
TEAD4 3 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 213 bp overlap
ChIP A549 ENCFF243FTL 185 bp overlap
ChIP WTC11 ENCFF114TZS 204 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 391 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 171 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 160 bp overlap
ZNF143 2 datasets
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 227 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 152 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
ZSCAN4 3 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap