chr6 : 106,967,967 106,969,424
1,457 bp 77 TFs 1 linked gene
This 1.5 kb open chromatin element is linked to CD24 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CD24 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:106,962,967 – 106,974,424
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 193 bp overlap
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 269 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 237 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 342 bp overlap
ATF2 4 datasets
ChIP H1 ENCFF295GZO 179 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 73 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 399 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 474 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 369 bp overlap
BRD4 1 dataset
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 171 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 318 bp overlap
CHD2 2 datasets
ChIP WA01 ENCSR000EBT.CHD2.WA01 137 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 98 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 305 bp overlap
ChIP H1 ENCFF126NLU 250 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 197 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 191 bp overlap
CREB1 5 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 253 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 123 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 191 bp overlap
ChIP WTC11 ENCFF297VCI 371 bp overlap
CREM 2 datasets
ChIP WTC11 ENCFF209ZUE 481 bp overlap
ChIP WTC11 ENCFF209ZUE 233 bp overlap
CTCF 6 datasets
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF531QOI 319 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 217 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 163 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 361 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 251 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 531 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 255 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 152 bp overlap
ERG 2 datasets
ChIP WTC11 ENCFF011YUL 281 bp overlap
ChIP WTC11 ENCFF011YUL 90 bp overlap
ESR1_pS118 4 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 412 bp overlap
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 431 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 419 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 378 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 130 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 300 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 167 bp overlap
GATA3 6 datasets
ChIP MCF-7 ENCFF352QVM 481 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 296 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 280 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 197 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 124 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 291 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 310 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 362 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 509 bp overlap
GATA6 1 dataset
ChIP OACP4-C GSE132680.GATA6.OACP4-C 374 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 214 bp overlap
HOXA7 1 dataset
ChIP A-549 ENCSR402OYZ.HOXA7.A-549 186 bp overlap
IFNA1 5 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 178 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 305 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 510 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 363 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 473 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 465 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 391 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 286 bp overlap
JUND 6 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 217 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 126 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 170 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 99 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 431 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 505 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 241 bp overlap
KDM5B 3 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 258 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 136 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 206 bp overlap
KMT2A 1 dataset
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 71 bp overlap
MORC2 2 datasets
ChIP H9 GSE95374.MORC2.H9 865 bp overlap
ChIP H9 GSE95374.MORC2.H9 486 bp overlap
MPHOSPH8 2 datasets
ChIP H9 GSE95374.MPHOSPH8.H9 806 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 508 bp overlap
MSX2 1 dataset
ChIP MCF-7 ENCSR604WXQ.MSX2.MCF-7 440 bp overlap
MYC 1 dataset
ChIP NCI-H128 GSE41105.MYC.NCI-H128 183 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 183 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 117 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 377 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 290 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 519 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCSR829WBA.OVOL1.MCF-7 304 bp overlap
PML 1 dataset
ChIP MCF-7 ENCFF839EHA 438 bp overlap
POLR2A 19 datasets
ChIP GM23338 ENCFF450WCS 327 bp overlap
ChIP GM23338 ENCFF450WCS 905 bp overlap
ChIP H1 ENCFF566JSR 619 bp overlap
ChIP H1 ENCFF770YBQ 293 bp overlap
ChIP H1 ENCFF770YBQ 230 bp overlap
ChIP H1 ENCFF770YBQ 308 bp overlap
ChIP H1 ENCFF833NJP 317 bp overlap
ChIP H1 ENCFF833NJP 613 bp overlap
ChIP MCF-7 ENCFF164XWP 250 bp overlap
ChIP body of pancreas ENCFF501FEC 897 bp overlap
ChIP body of pancreas ENCFF675RCN 268 bp overlap
ChIP body of pancreas ENCFF675RCN 234 bp overlap
ChIP body of pancreas ENCFF675RCN 814 bp overlap
ChIP stomach ENCFF719RDO 325 bp overlap
ChIP stomach ENCFF820WZN 248 bp overlap
ChIP stomach ENCFF820WZN 220 bp overlap
ChIP stomach ENCFF820WZN 560 bp overlap
ChIP transverse colon ENCFF610RWV 339 bp overlap
ChIP transverse colon ENCFF610RWV 467 bp overlap
POU2F1 2 datasets
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 199 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 329 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 254 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 254 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 289 bp overlap
PRRX2 2 datasets
ChIP WTC11 ENCFF107JGJ 301 bp overlap
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 197 bp overlap
REST 3 datasets
ChIP K-562 GSE70482.REST.K-562 183 bp overlap
ChIP neural ENCSR000BTV.REST.neural 189 bp overlap
ChIP neural cell ENCFF882LXX 505 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 300 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF896IJG 216 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 114 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 441 bp overlap
SIRT6 1 dataset
ChIP WA01 ENCSR000AUS.SIRT6.WA01 441 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE36578.SMAD3.BG03 95 bp overlap
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 160 bp overlap
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 153 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 244 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 165 bp overlap
SP4 3 datasets
ChIP WA01 ENCSR000BQV.SP4.WA01 75 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 253 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 443 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 412 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 416 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 202 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 286 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 72 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 159 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 418 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 215 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 268 bp overlap
USF1 2 datasets
ChIP WA01 ENCSR000BIU.USF1.WA01 137 bp overlap
ChIP WTC11 ENCFF699QGS 213 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 501 bp overlap
ZKSCAN8 2 datasets
ChIP WTC11 ENCFF666HNJ 345 bp overlap
ChIP WTC11 ENCFF666HNJ 305 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 150 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 222 bp overlap
ZNF423 2 datasets
ChIP WTC11 ENCFF574PBR 317 bp overlap
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 292 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 478 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap