chr6 : 89,354,071 89,354,274
203 bp 63 TFs 1 linked gene
This 203 bp open chromatin element is linked to UBE2J1 and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
UBE2J1 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:89,349,071 – 89,359,274
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 203 bp overlap
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 62 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 111 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 121 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 146 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 203 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 194 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 203 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 139 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 194 bp overlap
BRD4 8 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 138 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 130 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 203 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 203 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 201 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 203 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 203 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 109 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 203 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 80 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 203 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 113 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 84 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 203 bp overlap
ChIP DE DE-FOXA2-2 203 bp overlap
FOXP1 1 dataset
ChIP U2932 ERP010999.FOXP1.U2932 196 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 203 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 203 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 108 bp overlap
HNRNPK 3 datasets
ChIP HepG2 ENCFF493GNS 105 bp overlap
ChIP HepG2 ENCFF826MXP 100 bp overlap
ChIP K562 ENCFF954RNO 89 bp overlap
KMT2A 3 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 203 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 119 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 95 bp overlap
MED1 2 datasets
ChIP GM12878 GSE93080.MED1.GM12878 203 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 203 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 203 bp overlap
MEN1 1 dataset
ChIP SEM GSE83671.MEN1.SEM 100 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 105 bp overlap
MXI1 1 dataset
ChIP GM12878 ENCFF666NJR 203 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 193 bp overlap
MYC 1 dataset
ChIP Raji GSE30726.MYC.Raji 142 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 67 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 122 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 69 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 134 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 187 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 203 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 175 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 94 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 96 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
PCBP1 1 dataset
ChIP K562 ENCFF121LOV 153 bp overlap
PCBP2 1 dataset
ChIP K562 ENCFF299ETM 80 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 117 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 203 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF263VRI 203 bp overlap
ChIP GM12878 ENCFF263VRI 86 bp overlap
ChIP GM12878 ENCFF412KAE 195 bp overlap
ChIP GM12878 ENCFF521FXC 134 bp overlap
ChIP GM12891 ENCFF012SUT 203 bp overlap
ChIP GM12892 ENCFF245LYF 203 bp overlap
ChIP GM12892 ENCFF506PGQ 203 bp overlap
ChIP GM15510 ENCFF880HVJ 203 bp overlap
ChIP GM18526 ENCFF599EPS 107 bp overlap
ChIP GM18951 ENCFF079KKO 203 bp overlap
ChIP GM19099 ENCFF726IBN 203 bp overlap
ChIP Raji ENCFF613VGX 203 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 203 bp overlap
RELA 1 dataset
ChIP GM12891 ENCSR000EAI.RELA.GM12891 163 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 203 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 203 bp overlap
SIX1 2 datasets
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF587VYG 203 bp overlap
SIX4 1 dataset
ChIP HepG2 ENCFF372NPG 203 bp overlap
SMAD5 1 dataset
ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 91 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 127 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 203 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 203 bp overlap
SRF 1 dataset
ChIP GM12878 ENCFF878IIX 203 bp overlap
STAT3 1 dataset
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 118 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 182 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 203 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF506WWB 191 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 119 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 203 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 139 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 203 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 203 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 149 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 134 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 173 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 128 bp overlap
ZNF24 7 datasets
ChIP GM12878 ENCFF688STO 169 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 203 bp overlap
ChIP HEK293 ENCFF308WOW 203 bp overlap
ChIP HEK293 ENCFF308WOW 203 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 203 bp overlap
ChIP Hep-G2 ENCSR362NWP.ZNF24.Hep-G2 119 bp overlap
ChIP K562 ENCFF497GLV 203 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 203 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCFF233SGE 203 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCFF343DTU 203 bp overlap