chr6 : 80,331,546 80,331,884
338 bp 69 TFs 0 linked genes
This 338 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:80,326,546 – 80,336,884
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 188 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 268 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 159 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 132 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 238 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 156 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 300 bp overlap
BRD4 6 datasets
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 338 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 286 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 202 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 261 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 171 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 183 bp overlap
CDK9 1 dataset
ChIP HEK293T_SIBRD4 GSE51633.CDK9.HEK293T_SIBRD4 142 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 166 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 278 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 149 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 338 bp overlap
EGR1 1 dataset
ChIP macrophage_D1 GSE136216.EGR1.macrophage_D1 183 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 338 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 54 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 137 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 338 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 170 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 296 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 264 bp overlap
FOXA1 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 176 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 284 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 235 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 238 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 165 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 148 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 175 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 264 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 249 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 262 bp overlap
MAX 2 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 290 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 174 bp overlap
MED1 1 dataset
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 142 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 317 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE94782.MYCN.NB-1643 219 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 267 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
MYOG 2 datasets
ChIP RH4 GSE83726.MYOG.RH4 276 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 209 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 239 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 278 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 338 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 338 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 338 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 338 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 279 bp overlap
ChIP hESC GSE20650.NANOG.hESC 281 bp overlap
ChIP hESC GSE18292.NANOG.hESC 250 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 146 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 110 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 251 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 8 datasets
ChIP GM23338 ENCFF333SNB 244 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 338 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 266 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 282 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 132 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 173 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 231 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 253 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 280 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 338 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 183 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 287 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 174 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 126 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 338 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 179 bp overlap
SMARCA4 8 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 338 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 209 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 338 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 338 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 338 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 200 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 338 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 338 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 331 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 272 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 338 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 338 bp overlap
ChIP hESC GSE18292.SOX2.hESC 145 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 253 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 172 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 329 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 304 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 222 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 222 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 338 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 244 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 219 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 302 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 217 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 197 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 314 bp overlap
ZNF18 1 dataset
ChIP HEK293 GSE76494.ZNF18.HEK293 219 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 323 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 215 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 240 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 204 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 248 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 180 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 212 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 306 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 315 bp overlap