chr6 : 34,053,863 – 34,054,069
206 bp 57 TFs 1 linked gene
This 206 bp open chromatin element is linked to GRM4 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GRM4 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:34,048,863 – 34,059,069
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ARID1A 5 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 206 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 206 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 112 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 206 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 206 bp overlap
ARID2 2 datasets
ChIP MCF-7_parental GSE123284.ARID2.MCF-7_parental 64 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ARID2.MCF-7_parental_4-hydroxytamoxifen 95 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 119 bp overlap
ASCL1 4 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 146 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 121 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 206 bp overlap
CTCF 24 datasets
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 206 bp overlap
ChIP GM23338 ENCFF772DML 176 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 154 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 169 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 185 bp overlap
ChIP MCF-7 ENCFF162GNE 194 bp overlap
ChIP MCF-7 ENCFF198DQX 206 bp overlap
ChIP MCF-7 ENCFF424NQR 179 bp overlap
ChIP MCF-7 ENCFF494VXA 206 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 206 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 206 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 206 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 206 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 187 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 101 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 135 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 206 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 206 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 206 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 182 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 175 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 206 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 206 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 206 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 129 bp overlap
EHF 1 dataset
ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 111 bp overlap
ELF1 5 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 95 bp overlap
ChIP MCF-7 ENCFF305BNP 206 bp overlap
ChIP MCF-7 ENCFF687CWI 128 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 160 bp overlap
ELF3 2 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 203 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 206 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 141 bp overlap
ESR1 17 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 168 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 206 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 152 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 206 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 135 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 206 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 187 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 167 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 173 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 132 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 104 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 98 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 118 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 102 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 130 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 206 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 206 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 206 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 206 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 206 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 189 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 206 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 206 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 123 bp overlap
FOS 3 datasets
ChIP MCF-7 ENCFF282FWZ 140 bp overlap
ChIP MCF-7 ENCFF282FWZ 206 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 148 bp overlap
FOXA1 11 datasets
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 107 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 173 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 137 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 87 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 76 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 108 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 135 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 143 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 73 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 122 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 147 bp overlap
GABPA 1 dataset
ChIP MCF-7 ENCSR000BUK.GABPA.MCF-7 164 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 136 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 198 bp overlap
GRHL2 3 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 73 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 139 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 58 bp overlap
HDAC1 2 datasets
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 96 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 206 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 164 bp overlap
JUN 2 datasets
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 160 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 206 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 206 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 206 bp overlap
MAX 3 datasets
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 141 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 206 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 206 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCFF913ACQ 206 bp overlap
MTA1 1 dataset
ChIP MCF-7 ENCSR348JOJ.MTA1.MCF-7 185 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 105 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 206 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 206 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 183 bp overlap
NRF1 1 dataset
ChIP HCC1954 GSE67867.NRF1.HCC1954 151 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 206 bp overlap
PGR 1 dataset
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 87 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 206 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 190 bp overlap
ChIP H1 ENCFF967OJF 168 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 186 bp overlap
ChIP Ishikawa ENCFF570JVV 205 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 114 bp overlap
ChIP MCF-7 ENCFF694KOM 206 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 158 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 163 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 171 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 137 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 165 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 189 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 160 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 161 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 143 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 206 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 206 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 206 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 147 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 194 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 121 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 206 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 206 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 163 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 206 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 206 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 168 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 147 bp overlap
SOX4 1 dataset
ChIP HCC1954 GSE104760.SOX4.HCC1954 201 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 206 bp overlap
SPI1 3 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 74 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 113 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 101 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 206 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 172 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 163 bp overlap
STAT3 6 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 157 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 182 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 115 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 161 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 97 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 62 bp overlap
TEAD4 1 dataset
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 134 bp overlap
TFAP2C 4 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 171 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 154 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 108 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 206 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 102 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 203 bp overlap
ZHX2 1 dataset
ChIP MCF-7 ENCSR876UYH.ZHX2.MCF-7 150 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 206 bp overlap
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