chr6 : 27,149,156 27,149,546
390 bp 68 TFs 4 linked genes
This 390 bp open chromatin element is linked to 4 target genes and is bound by 68 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
MIR3143 1.5 kb Proximal Proximity
H2AC12 2.1 kb Proximal Proximity
H2BC12 2.3 kb Proximal Proximity
H4C9 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:27,144,156 – 27,154,546
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 80 bp overlap
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 190 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 249 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 258 bp overlap
BCLAF1 2 datasets
ChIP K-562 ENCSR000BKH.BCLAF1.K-562 166 bp overlap
ChIP K562 ENCFF936NCS 221 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 390 bp overlap
BRD3 2 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 227 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 215 bp overlap
BRD4 9 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 272 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 206 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 293 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 238 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 375 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 196 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 252 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 236 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 184 bp overlap
CAMTA2 1 dataset
ChIP K562 ENCFF975FJR 252 bp overlap
CGGBP1 1 dataset
ChIP K562 ENCFF412PRC 50 bp overlap
CHD2 2 datasets
ChIP K562 ENCFF857WME 267 bp overlap
ChIP K562 ENCFF857WME 250 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 214 bp overlap
CTCF 1 dataset
ChIP MM1-S GSE43743.CTCF.MM1-S 146 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 266 bp overlap
ChIP K562 ENCFF574LOW 342 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 195 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF885NMS 390 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 184 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 379 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 377 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 286 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 272 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 171 bp overlap
KLF10 1 dataset
ChIP K562 ENCFF864UDH 291 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 166 bp overlap
MAFF 1 dataset
ChIP K562 ENCFF071YKK 233 bp overlap
MLLT1 3 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 390 bp overlap
ChIP K562 ENCFF074XRJ 390 bp overlap
ChIP K562 ENCFF871DSA 116 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 248 bp overlap
MYB 2 datasets
ChIP PF-382 GSE94000.MYB.PF-382 167 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 164 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 243 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 119 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 171 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 181 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 191 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 286 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 198 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 186 bp overlap
NONO 2 datasets
ChIP K-562 GSE120104.NONO.K-562 314 bp overlap
ChIP K-562 ENCSR415TXN.NONO.K-562 284 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 230 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 312 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 164 bp overlap
POLR2A 5 datasets
ChIP H1 ENCFF566JSR 390 bp overlap
ChIP H1 ENCFF833NJP 387 bp overlap
ChIP K562 ENCFF137JSF 390 bp overlap
ChIP K562 ENCFF215CWW 203 bp overlap
ChIP K562 ENCFF262YXJ 390 bp overlap
PTBP1 1 dataset
ChIP K-562 GSE120104.PTBP1.K-562 226 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 102 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 116 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 164 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 284 bp overlap
SMAD5 2 datasets
ChIP K-562 ENCSR000FCD.SMAD5.K-562 375 bp overlap
ChIP K562 ENCFF941FJJ 371 bp overlap
SPI1 1 dataset
ChIP K562 ENCFF410ORC 205 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 183 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 150 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 383 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 127 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 128 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 240 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 210 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 151 bp overlap
TFAP4 2 datasets
ChIP K562 ENCFF727PXG 187 bp overlap
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 283 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 118 bp overlap
TRIM25 1 dataset
ChIP K562 ENCFF376TLP 74 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 263 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 252 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 273 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF215OUF 390 bp overlap
ChIP K562 ENCFF215OUF 359 bp overlap
ZBTB7A 4 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 324 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 158 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 223 bp overlap
ChIP K562 ENCFF579ZGM 322 bp overlap
ZC3H4 1 dataset
ChIP K562 ENCFF343JOP 337 bp overlap
ZNF263 2 datasets
ChIP K-562 ENCSR000EWN.ZNF263.K-562 262 bp overlap
ChIP K562 ENCFF650LPZ 390 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 233 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 151 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 144 bp overlap
ZNF431 1 dataset
ChIP K562 ENCFF431VZH 277 bp overlap
ZNF717 1 dataset
ChIP K562 ENCFF839EKA 309 bp overlap