chr5 : 156,800,921 – 156,801,278
357 bp 76 TFs 0 linked genes
This 357 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:156,795,921 – 156,806,278
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ARNT2 1 dataset
Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
ATF2 1 dataset
ChIP H1 ENCFF295GZO 347 bp overlap
Arnt 1 dataset
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 357 bp overlap
CLOCK 1 dataset
Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap
CTCF 77 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 238 bp overlap
ChIP D721Med ENCFF513FYD 204 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 151 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 136 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 176 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 201 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 236 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 191 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 198 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 191 bp overlap
ChIP HepG2 ENCFF757EKU 299 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 251 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 321 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 123 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 184 bp overlap
ChIP Loucy ENCFF359TVQ 119 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 273 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 160 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 349 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 150 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 283 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 148 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 154 bp overlap
ChIP SK-N-SH ENCFF731NJX 233 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 204 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 222 bp overlap
ChIP brain ENCFF163BBN 357 bp overlap
ChIP chondrocyte ENCFF134ORZ 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 308 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF087VBI 349 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 281 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 337 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 349 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 349 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 348 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 320 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 336 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 320 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 353 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 278 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 345 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 347 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 286 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 351 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 310 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 296 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 346 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 352 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 318 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 317 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF784LWO 333 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 338 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 351 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 314 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 357 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 253 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 111 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 253 bp overlap
ChIP gastrocnemius-medialis ENCSR428BKN.CTCF.gastrocnemius-medialis 220 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 188 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 220 bp overlap
ChIP heart left ventricle ENCFF354HOQ 291 bp overlap
ChIP heart left ventricle ENCFF842XRG 275 bp overlap
ChIP heart left ventricle ENCFF842XRG 76 bp overlap
ChIP heart right ventricle ENCFF435TKW 293 bp overlap
ChIP heart right ventricle ENCFF577TID 297 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 175 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 152 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 147 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 156 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 166 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 210 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 199 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 197 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Creb3l2 1 dataset
Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 179 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 357 bp overlap
EZH2 2 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 305 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 344 bp overlap
ChIP DE DE-FOXA2-2 285 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 271 bp overlap
ChIP DE DE-GATA4-2 268 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 276 bp overlap
ChIP DE DE-GATA6-2 284 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 315 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 292 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 338 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 227 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 260 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
HES1 1 dataset
Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap
HES2 1 dataset
Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap
HES5 1 dataset
Motif DE_12h DE_12h-HES5_MA0821.2 10 bp overlap
HES6 1 dataset
Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap
HEY1 1 dataset
Motif DE_12h DE_12h-HEY1_MA0823.1 10 bp overlap
HEY2 1 dataset
Motif DE_12h DE_12h-HEY2_MA0649.2 9 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 323 bp overlap
MAX 5 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 259 bp overlap
ChIP H1 ENCFF914VQY 215 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 352 bp overlap
ChIP WTC11 ENCFF223QFY 357 bp overlap
MAX::MYC 1 dataset
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MLXIPL 1 dataset
Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
MYC 2 datasets
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 238 bp overlap
MYCN 2 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 254 bp overlap
Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap
Mlxip 1 dataset
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 357 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 354 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 357 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 357 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 314 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 306 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
Npas2 1 dataset
Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap
PLAGL2 1 dataset
Motif DE_12h DE_12h-PLAGL2_MA1548.2 8 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 3 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 357 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 357 bp overlap
POU5F1B 1 dataset
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
RAD21 10 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 164 bp overlap
ChIP GM12878 ENCFF101UQZ 185 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 164 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF906QIS 198 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 148 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 193 bp overlap
ChIP SK-N-SH ENCFF747MAS 229 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 167 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 207 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 303 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 250 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 225 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 298 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 357 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 357 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 357 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 355 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 357 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 357 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 81 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 211 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 324 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 170 bp overlap
STAG1 2 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 174 bp overlap
ChIP HepG2 ENCFF843EBZ 250 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 145 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 152 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 293 bp overlap
TFE3 1 dataset
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 357 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 215 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 190 bp overlap
ChIP WTC11 ENCFF699QGS 293 bp overlap
USF2 3 datasets
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 164 bp overlap
ChIP WTC11 ENCFF139JAW 308 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 294 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ChIP HCT-116_sc1 GSE127960.ZIC5.HCT-116_sc1 201 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 278 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
ZSCAN29 1 dataset
Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
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