chr5 : 123,443,218 – 123,443,802
584 bp 72 TFs 0 linked genes
This 584 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:123,438,218 – 123,448,802
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 160 bp overlap
Crx 3 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif DE_24h DE_24h-Crx_MA0467.3 6 bp overlap
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 344 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOSL2 2 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXD2 2 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
FOXD3 2 datasets
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Motif DE_24h DE_24h-FOXD3_MA0041.3 14 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1FLI1_MA1956.2 13 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 305 bp overlap
GLI3 2 datasets
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
Motif DE_36h DE_36h-GLI3_MA1491.3 15 bp overlap
GLIS2 2 datasets
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
Motif DE_36h DE_36h-GLIS2_MA0736.1 14 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap
GSC 3 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif DE_24h DE_24h-GSC_MA0648.2 6 bp overlap
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif DE_24h DE_24h-GSC2_MA0891.2 6 bp overlap
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
Hmga1 2 datasets
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap
IRF7 2 datasets
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 339 bp overlap
Lhx3 2 datasets
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
Motif DE_24h DE_24h-Lhx3_MA0135.2 12 bp overlap
MEF2A 2 datasets
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
Motif DE_24h DE_24h-MEF2A_MA0052.5 10 bp overlap
MEF2B 2 datasets
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
Motif DE_24h DE_24h-MEF2B_MA0660.1 12 bp overlap
MEF2C 2 datasets
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
Motif DE_24h DE_24h-MEF2C_MA0497.2 11 bp overlap
MEF2D 2 datasets
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
Motif DE_24h DE_24h-MEF2D_MA0773.1 12 bp overlap
MGA 2 datasets
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MYB 2 datasets
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Motif DE_24h DE_24h-MYB_MA0100.4 6 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif DE_24h DE_24h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 287 bp overlap
Nanog 3 datasets
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Motif DE_24h DE_24h-Nanog_MA2339.1 7 bp overlap
Motif DE_36h DE_36h-Nanog_MA2339.1 7 bp overlap
ONECUT3 2 datasets
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_24h DE_24h-ONECUT3_MA0757.2 12 bp overlap
OTX1 3 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif DE_24h DE_24h-OTX1_MA0711.2 6 bp overlap
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 3 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif DE_24h DE_24h-OTX2_MA0712.3 7 bp overlap
Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap
PITX1 3 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif DE_24h DE_24h-PITX1_MA0682.3 6 bp overlap
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 3 datasets
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
Motif DE_24h DE_24h-PITX2_MA1547.2 8 bp overlap
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 3 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif DE_24h DE_24h-PITX3_MA0714.2 6 bp overlap
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
RHOXF1 3 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_24h DE_24h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 334 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TCF7L1 2 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0815.1 13 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB12 2 datasets
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
Motif DE_24h DE_24h-ZBTB12_MA1649.2 7 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZNF213 4 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 2 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif DE_24h DE_24h-ZNF384_MA1125.2 8 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
ZNF768 1 dataset
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
Zfp809 3 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
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