chr5 : 93,280,486 93,281,538
1,052 bp 77 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:93,275,486 – 93,286,538
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AHDC1 2 datasets
ChIP HepG2 ENCFF069FSH 531 bp overlap
ChIP HepG2 ENCFF069FSH 531 bp overlap
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 193 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 324 bp overlap
BRD4 5 datasets
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 269 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 166 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 641 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 266 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 596 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 154 bp overlap
CTCF 1 dataset
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 63 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF896HSY 398 bp overlap
ChIP BLaER1 ENCFF896HSY 279 bp overlap
Crx 1 dataset
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
DLX6 1 dataset
ChIP Hep-G2 ENCSR272TOJ.DLX6.Hep-G2 199 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 265 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 287 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 265 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 748 bp overlap
ChIP DE DE-FOXA2-2 571 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 384 bp overlap
GATA2 5 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP SH-SY5Y ENCFF485YIB 242 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 416 bp overlap
ChIP SK-N-SH ENCFF764OZD 385 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 224 bp overlap
GATA3 10 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 437 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 293 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 227 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 207 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 144 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 165 bp overlap
ChIP SH-SY5Y ENCFF475HYF 431 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 399 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 259 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 278 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 501 bp overlap
ChIP DE DE-GATA4-2 655 bp overlap
ChIP foregut GSE117136.GATA4.foregut 267 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 798 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 766 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 495 bp overlap
ChIP DE DE-GATA6-2 618 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 541 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 314 bp overlap
ChIP foregut GSE117136.GATA6.foregut 444 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 576 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 571 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 254 bp overlap
GSC 1 dataset
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 535 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 465 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 368 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 328 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 448 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 356 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 142 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 223 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 89 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 424 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 255 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 272 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF970YZO 377 bp overlap
OTX1 1 dataset
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 209 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 325 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 395 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 251 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 492 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 218 bp overlap
PITX1 1 dataset
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 292 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 269 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 172 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 253 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 205 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 657 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 362 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 429 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 117 bp overlap
REST 1 dataset
ChIP neural cell ENCFF882LXX 251 bp overlap
RHOXF1 1 dataset
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Rarg 1 dataset
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
Rhox11 1 dataset
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 150 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 764 bp overlap
SMARCC1 1 dataset
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 271 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 220 bp overlap
SOX14 1 dataset
Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap
SOX15 1 dataset
Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 270 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 518 bp overlap
SOX18 1 dataset
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 184 bp overlap
SOX8 1 dataset
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
Sox17 1 dataset
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 225 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 163 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 195 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 232 bp overlap
ZNF257 1 dataset
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 210 bp overlap
ChIP HepG2 ENCFF490FFQ 371 bp overlap
ZNF667 1 dataset
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
ZNF85 1 dataset
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
ZSCAN31 1 dataset
Motif DE_48h DE_48h-ZSCAN31_MA1722.2 18 bp overlap