chr5 : 86,386,181 – 86,386,516
335 bp 112 TFs 0 linked genes
This 335 bp open chromatin element has no linked target genes and is bound by 112 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:86,381,181 – 86,391,516
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
ARGFX 2 datasets
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap
ATF2 2 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
ATF3 2 datasets
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
Motif ES_0h ES_0h-ATF3_MA0605.3 10 bp overlap
ATF7 2 datasets
Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap
Motif ES_0h ES_0h-ATF7_MA0834.2 10 bp overlap
Alx1 2 datasets
Motif DE_12h DE_12h-Alx1_MA0854.2 8 bp overlap
Motif ES_0h ES_0h-Alx1_MA0854.2 8 bp overlap
Alx4 2 datasets
Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap
Motif ES_0h ES_0h-Alx4_MA0853.2 12 bp overlap
Arx 2 datasets
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
CREM 2 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Motif ES_0h ES_0h-CREM_MA0609.3 10 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 320 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 314 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Creb5 2 datasets
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
Motif ES_0h ES_0h-Creb5_MA0840.2 10 bp overlap
DRGX 2 datasets
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EMX1 2 datasets
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
EN2 2 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
ESX1 2 datasets
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
Motif ES_0h ES_0h-ESX1_MA0644.3 7 bp overlap
EVX1 2 datasets
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
Motif ES_0h ES_0h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUN 2 datasets
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1136.1 10 bp overlap
Motif ES_0h ES_0h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1139.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 189 bp overlap
GBX1 2 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GSX1 2 datasets
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXA1 2 datasets
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXA2 2 datasets
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXB1 2 datasets
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXB2 2 datasets
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXC8 2 datasets
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
Motif ES_0h ES_0h-HOXD3_MA0912.2 8 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
ISX 2 datasets
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
Motif ES_0h ES_0h-JDP2_MA0656.2 10 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
Motif ES_0h ES_0h-JUNB_MA1140.3 11 bp overlap
LBX1 2 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LHX5 2 datasets
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
Motif ES_0h ES_0h-LHX6_MA0658.2 8 bp overlap
LHX9 2 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
LMX1A 2 datasets
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
Motif ES_0h ES_0h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Motif ES_0h ES_0h-LMX1B_MA0703.3 8 bp overlap
Lhx1 2 datasets
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
Motif ES_0h ES_0h-Lhx1_MA1518.3 10 bp overlap
Lhx4 2 datasets
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEOX1 2 datasets
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 310 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 227 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR552YGL.NFE2.K-562 66 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap
NKX6-1 2 datasets
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
Motif ES_0h ES_0h-NOTO_MA0710.2 7 bp overlap
NUP98-HOXA9 1 dataset
ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 161 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 250 bp overlap
PAX4 2 datasets
Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap
Motif ES_0h ES_0h-PAX4_MA0068.2 8 bp overlap
PDX1 2 datasets
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 197 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
POU6F2 2 datasets
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
PRRX1 2 datasets
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
PRRX2 2 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
RAX2 2 datasets
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
SHOX 2 datasets
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
Shox2 2 datasets
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
TLX2 2 datasets
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
Motif ES_0h ES_0h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
VSX1 2 datasets
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
Motif ES_0h ES_0h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
Motif ES_0h ES_0h-VSX2_MA0726.2 7 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
mix-a 2 datasets
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap
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