chr5 : 77,231,266 77,232,033
767 bp 69 TFs 5 linked genes
This 767 bp open chromatin element is linked to 5 target genes and is bound by 69 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
PDE8B 145.0 kb Distal Multiome
ZBED3-AS1 145.0 kb Distal Multiome
AGGF1 201.3 kb Distal Multiome
WDR41 260.8 kb Distal Multiome
CRHBP 278.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:77,226,266 – 77,237,033
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 254 bp overlap
AR 2 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 135 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 185 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 241 bp overlap
BRD4 2 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 418 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 84 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 258 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 104 bp overlap
CEBPA 7 datasets
ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 131 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 279 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 167 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 190 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 171 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 127 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 113 bp overlap
CTCF 97 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 189 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 138 bp overlap
ChIP A549 ENCFF182TCQ 209 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 137 bp overlap
ChIP C4-2B ENCFF821XVN 251 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 112 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 125 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 372 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 188 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 162 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 238 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 113 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 102 bp overlap
ChIP GM23338 ENCFF531QOI 277 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 163 bp overlap
ChIP H1 ENCFF414GZI 193 bp overlap
ChIP H1 ENCFF764RHO 246 bp overlap
ChIP H9 ENCFF152GTF 309 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 159 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 202 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 192 bp overlap
ChIP HEK293 ENCFF498RMM 239 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 120 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 146 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 181 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 150 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 252 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 237 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 146 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 165 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 118 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 128 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 220 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 239 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 127 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 106 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 134 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 110 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 275 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 121 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 219 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 189 bp overlap
ChIP MCF-7 ENCFF844STM 189 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 212 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 115 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 122 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 462 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 244 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 287 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 224 bp overlap
ChIP PC-9 ENCFF539ULB 121 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 97 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 150 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 241 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 198 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 198 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 154 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 329 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 238 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 233 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 190 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 213 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 165 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 163 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 205 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 167 bp overlap
ChIP chondrocyte ENCFF134ORZ 131 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 384 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 364 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 325 bp overlap
ChIP endodermal cell ENCFF471YCZ 66 bp overlap
ChIP endodermal cell ENCFF471YCZ 226 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 258 bp overlap
ChIP heart left ventricle ENCFF548XHH 260 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 124 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 145 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP islet ERP004003.CTCF.islet 190 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 134 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 116 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 211 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 255 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 165 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 228 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 179 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 60 bp overlap
ChIP thyroid gland ENCFF631QRY 326 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 282 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 226 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 77 bp overlap
Cebpa 7 datasets
ChIP BLaER1 ENCFF031ISE 207 bp overlap
ChIP BLaER1 ENCFF093OYK 259 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF346MCV 270 bp overlap
ChIP BLaER1 ENCFF364PUR 321 bp overlap
ChIP BLaER1 ENCFF798NMV 368 bp overlap
ChIP BLaER1 ENCFF896HSY 464 bp overlap
EBF1 2 datasets
ChIP ASC GSE54889.EBF1.ASC 220 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 207 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 209 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 205 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 416 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 400 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 93 bp overlap
ERG 3 datasets
ChIP ME-1 GSE46044.ERG.ME-1 169 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 66 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 285 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 97 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 188 bp overlap
FLI1 3 datasets
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 299 bp overlap
ChIP UAE GSE23730.FLI1.UAE 212 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 272 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 554 bp overlap
ChIP DE DE-FOXA2-2 567 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 281 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 220 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 172 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 661 bp overlap
ChIP DE DE-GATA4-2 691 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 685 bp overlap
ChIP DE DE-GATA6-2 724 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 305 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 324 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 767 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 420 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 558 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 223 bp overlap
HDAC3 1 dataset
ChIP AML_shaml1-eto GSE131939.HDAC3.AML_shaml1-eto 121 bp overlap
HOXA9 1 dataset
ChIP SEM GSE38339.HOXA9.SEM 173 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 467 bp overlap
JMJD1C 3 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 189 bp overlap
ChIP HL-60 GSE63484.JMJD1C.HL-60 207 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 132 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 266 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 194 bp overlap
KDM4B 1 dataset
ChIP K-562 ENCSR642VZY.KDM4B.K-562 146 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 399 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 457 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 195 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 196 bp overlap
MYB 3 datasets
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 277 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 211 bp overlap
MYC 1 dataset
ChIP NB4 ENCFF142PRP 317 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 110 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 246 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 182 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 171 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 86 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 207 bp overlap
ChIP H1 ENCFF967OJF 213 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 307 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 151 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 230 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 216 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 192 bp overlap
Rfx6 1 dataset
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 325 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 411 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 624 bp overlap
SMAD3 1 dataset
Motif DE_48h DE_48h-SMAD3_MA0795.1 10 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 206 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 145 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 154 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 160 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 383 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 576 bp overlap
SPI1 20 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 134 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 186 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 139 bp overlap
ChIP GM12878 ENCFF134LCP 211 bp overlap
ChIP GM12891 ENCFF563IUT 153 bp overlap
ChIP HL-60 ENCFF645GBT 186 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 108 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 112 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 82 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 197 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 156 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 156 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 80 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 198 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 120 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 165 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 153 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 158 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 123 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 106 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 218 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 191 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 169 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 120 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 138 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 122 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 257 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 139 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 514 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 274 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 198 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 211 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 167 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 197 bp overlap