chr5 : 56,698,612 56,699,601
989 bp 81 TFs 0 linked genes
This 989 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:56,693,612 – 56,704,601
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 128 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 154 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 204 bp overlap
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 341 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 596 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 272 bp overlap
BRD4 21 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 214 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 539 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 243 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 242 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 272 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 104 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 228 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 365 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 327 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 316 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 524 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 280 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 323 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 635 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 204 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 219 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 448 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 712 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 989 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 164 bp overlap
ChIP hESC GSE33281.BRD4.hESC 77 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 227 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 446 bp overlap
CDK8 3 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 511 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 309 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 559 bp overlap
CDK9 6 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 398 bp overlap
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 221 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 206 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 211 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 208 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 181 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 612 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 67 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 151 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 317 bp overlap
ChIP BLaER1 ENCFF460KDD 118 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 117 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 362 bp overlap
EP300 3 datasets
ChIP 697 GSE138031.EP300.697 399 bp overlap
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 144 bp overlap
EZH2 2 datasets
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 180 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 81 bp overlap
FOXA1 2 datasets
ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 330 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 518 bp overlap
ChIP DE DE-FOXA2-2 523 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 448 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 150 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-2 612 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 732 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 149 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 658 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 681 bp overlap
GATA6 11 datasets
ChIP AGS GSE51705.GATA6.AGS 148 bp overlap
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 801 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 439 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 949 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 570 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 488 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 214 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 168 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 367 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 950 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 140 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 332 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 174 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 643 bp overlap
KMT2A 4 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 321 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 373 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 271 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 217 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 357 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 301 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 411 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 353 bp overlap
MED1 9 datasets
ChIP 697 GSE138031.MED1.697 177 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 468 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 252 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 473 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 278 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 374 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 254 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 360 bp overlap
ChIP MOLM-14_Veh GSE124963.MED1.MOLM-14_Veh 310 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 407 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 679 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 134 bp overlap
MYB 3 datasets
ChIP SEM GSE117864.MYB.SEM 230 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 263 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 246 bp overlap
MYC 4 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 186 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 462 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 173 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 363 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 136 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 257 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 206 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 149 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 242 bp overlap
NEUROG2 5 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 272 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 234 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 312 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 215 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 219 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 646 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 205 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 286 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 555 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 277 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 130 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 72 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 170 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE126634.RAD21.HAP1 296 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 525 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 496 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 216 bp overlap
RUNX1 2 datasets
ChIP 697 GSE138031.RUNX1.697 154 bp overlap
ChIP 697 GSE138031.RUNX1.697 202 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 591 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 233 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 288 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 55 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 285 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 141 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 165 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 296 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 732 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 192 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 130 bp overlap
STAT3 3 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 278 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 372 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 225 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 306 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 155 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 152 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 471 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 768 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 255 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 120 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 617 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 299 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 144 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 721 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 236 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 223 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 227 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 437 bp overlap
ZNF93 1 dataset
ChIP HEK293T GSE78099.ZNF93.HEK293T 160 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 185 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 341 bp overlap