chr5 : 40,674,730 – 40,675,176
446 bp 59 TFs 2 linked genes
This 446 bp open chromatin element is linked to ENSG00000289540 and PTGER4 and is bound by 59 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289540 4.1 kb Proximal Proximity
PTGER4 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:40,669,730 – 40,680,176
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 250 bp overlap
BRD4 2 datasets
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 318 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 282 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 168 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 188 bp overlap
CEBPB 1 dataset
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
CHD4 1 dataset
ChIP keratinocyte_CTR GSE139685.CHD4.keratinocyte_CTR 135 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 277 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 338 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 282 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 387 bp overlap
ChIP BLaER1 ENCFF274GAT 266 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 205 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 171 bp overlap
EP300 1 dataset
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 261 bp overlap
ESR1 14 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 200 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 186 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 111 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.ESR1.MCF-7_ARID1A-KO 86 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 59 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 112 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 257 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 103 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 243 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 147 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 101 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 195 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 148 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 189 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 159 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 162 bp overlap
FOXA1 3 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 87 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 71 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 79 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE29180.GATA3.Jurkat 104 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 342 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 340 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 367 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 354 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 175 bp overlap
HMBOX1 2 datasets
ChIP HeLa GSE46237.HMBOX1.HeLa 257 bp overlap
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 171 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 162 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 264 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 162 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 300 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 246 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 137 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 292 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 232 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 230 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 292 bp overlap
MAX 2 datasets
ChIP HeLa-S3 ENCFF019SXC 220 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 148 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 119 bp overlap
MYC 3 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 166 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 233 bp overlap
ChIP MCF-10A ENCSR000DOM.MYC.MCF-10A 176 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 184 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 171 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 107 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 332 bp overlap
RAD21 2 datasets
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 413 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 106 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 319 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 318 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 180 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 271 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 173 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 315 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 408 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 381 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 262 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 375 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 232 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 217 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 177 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 355 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 281 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 292 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 292 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 265 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 119 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 124 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 258 bp overlap
TP63 17 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 446 bp overlap
ChIP EP156T GSE43111.TP63.EP156T 137 bp overlap
ChIP HCC95 GSE46837.TP63.HCC95 158 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 268 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 400 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 218 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 434 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 243 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 339 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP63.keratinocyte_ADRIA 180 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 335 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 366 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 376 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 332 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 340 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 380 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 234 bp overlap
USF2 1 dataset
ChIP HeLa-S3 ENCFF765YUZ 291 bp overlap
ZMYM2 1 dataset
ChIP MCF-10A GSE101921.ZMYM2.MCF-10A 347 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 231 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 230 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 172 bp overlap
ZNF582 1 dataset
ChIP HEK293T GSE78099.ZNF582.HEK293T 65 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 280 bp overlap
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