chr5 : 12,660,411 12,661,168
757 bp 68 TFs 0 linked genes
This 757 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:12,655,411 – 12,666,168
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 345 bp overlap
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ATF1 1 dataset
ChIP WTC11 ENCFF354DFT 451 bp overlap
ATF2 1 dataset
ChIP H1 ENCFF295GZO 245 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 101 bp overlap
CREB1 1 dataset
ChIP WTC11 ENCFF297VCI 356 bp overlap
CTCF 16 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 198 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 238 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 177 bp overlap
ChIP endodermal cell ENCFF471YCZ 161 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 130 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 306 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
E2F1 3 datasets
Motif ES_0h ES_0h-E2F1_MA0024.3 12 bp overlap
ChIP WTC11 ENCFF994SXO 362 bp overlap
ChIP WTC11 ENCFF994SXO 417 bp overlap
E2F2 1 dataset
Motif ES_0h ES_0h-E2F2_MA0864.3 13 bp overlap
E2F4 1 dataset
Motif ES_0h ES_0h-E2F4_MA0470.3 13 bp overlap
E2F6 3 datasets
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 92 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 158 bp overlap
EMX1 2 datasets
ChIP WTC11 ENCFF692RZJ 605 bp overlap
ChIP WTC11 ENCFF692RZJ 415 bp overlap
ERG 2 datasets
ChIP WTC11 ENCFF011YUL 281 bp overlap
ChIP WTC11 ENCFF011YUL 215 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 396 bp overlap
FOXA1 1 dataset
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 63 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 525 bp overlap
FOXP2 1 dataset
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 177 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 113 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 529 bp overlap
MPHOSPH8 2 datasets
ChIP H9 GSE95374.MPHOSPH8.H9 210 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 77 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NR3C1 1 dataset
ChIP WTC11 ENCFF422OEM 557 bp overlap
Nfe2l2 1 dataset
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
POLR2A 6 datasets
ChIP GM23338 ENCFF450WCS 156 bp overlap
ChIP GM23338 ENCFF450WCS 604 bp overlap
ChIP H1 ENCFF566JSR 416 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 360 bp overlap
ChIP H1 ENCFF833NJP 340 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RFX7 1 dataset
Motif ES_0h ES_0h-RFX7_MA1554.2 8 bp overlap
SMAD3 1 dataset
ChIP WTC11 ENCFF815YYQ 357 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 154 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 441 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 178 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 88 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 126 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 224 bp overlap
ChIP K562 ENCFF875HLX 402 bp overlap
ChIP K562 ENCFF875HLX 465 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZIC1 1 dataset
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC5 1 dataset
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 230 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF281 2 datasets
ChIP WTC11 ENCFF551GAV 377 bp overlap
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF354C 2 datasets
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF384 1 dataset
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF417 1 dataset
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 204 bp overlap
ZNF532 2 datasets
ChIP WTC11 ENCFF373VBX 285 bp overlap
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF610 1 dataset
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF652 1 dataset
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
ZNF667 1 dataset
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 100 bp overlap
ZNF677 1 dataset
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZNF93 1 dataset
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap