chr3 : 113,002,330 113,003,286
956 bp 70 TFs 0 linked genes
This 956 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:112,997,330 – 113,008,286
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 268 bp overlap
ChIP K562 ENCFF938UXQ 168 bp overlap
BRD4 6 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 114 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 186 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 141 bp overlap
ChIP T-cell_iBET-BD2 GSE138084.BRD4.T-cell_iBET-BD2 201 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 411 bp overlap
EHF 1 dataset
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 141 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ETS1 3 datasets
ChIP CD4-pos GSE146787.ETS1.CD4-pos 433 bp overlap
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 254 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 220 bp overlap
ETV1 2 datasets
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap
Elf5 1 dataset
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FOXA1 1 dataset
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 226 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 329 bp overlap
ChIP DE DE-FOXA2-1 544 bp overlap
ChIP DE DE-FOXA2-2 547 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 106 bp overlap
GABPA 2 datasets
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 213 bp overlap
GATA4 2 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 339 bp overlap
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 314 bp overlap
ChIP DE DE-GATA6-2 286 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 327 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 213 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 211 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 2 datasets
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 161 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 171 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 313 bp overlap
MAZ 1 dataset
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
MED1 2 datasets
ChIP CD4_Th1_DMSO GSE62482.MED1.CD4_Th1_DMSO 111 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 216 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 143 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 220 bp overlap
PLAG1 1 dataset
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF263VRI 236 bp overlap
ChIP GM12878 ENCFF263VRI 481 bp overlap
ChIP GM12878 ENCFF412KAE 530 bp overlap
ChIP GM12878 ENCFF412KAE 625 bp overlap
ChIP GM12892 ENCFF542ZFO 525 bp overlap
ChIP K562 ENCFF262YXJ 525 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 379 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 461 bp overlap
ChIP sigmoid colon ENCFF748YVT 150 bp overlap
ChIP sigmoid colon ENCFF754JQR 74 bp overlap
ChIP spleen ENCFF044PYR 150 bp overlap
ChIP transverse colon ENCFF607LKE 117 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 583 bp overlap
ChIP HepG2 ENCFF508UTS 583 bp overlap
Plagl1 1 dataset
Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap
Prdm15 1 dataset
Motif DE_36h DE_36h-Prdm15_MA1616.2 11 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 73 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 255 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 147 bp overlap
SMAD4 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 55 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD4.HGrC1_WT-TGF 169 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 178 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 173 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 236 bp overlap
SPI1 5 datasets
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 274 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 295 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 221 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 107 bp overlap
SPIB 2 datasets
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 190 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 371 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 167 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 104 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 273 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 217 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 210 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 169 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 134 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Yy1 1 dataset
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
ZBTB11 1 dataset
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF175 2 datasets
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 251 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF708 1 dataset
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 451 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 337 bp overlap