chr3 : 18,438,441 18,438,793
352 bp 60 TFs 2 linked genes
This 352 bp open chromatin element is linked to SATB1 and SATB1-AS1 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SATB1 6.1 kb Proximal Proximity
SATB1-AS1 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:18,433,441 – 18,443,793
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 352 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 352 bp overlap
BCL11B 2 datasets
ChIP PBMC_T-reg GSE120872.BCL11B.PBMC_T-reg 175 bp overlap
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 121 bp overlap
BRD2 5 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 169 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 352 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 295 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 348 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 343 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 352 bp overlap
BRD4 18 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 260 bp overlap
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 205 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 349 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 136 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 303 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 352 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 352 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 352 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 352 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 181 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 288 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 99 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 352 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 214 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 242 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 105 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 352 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 352 bp overlap
CDK8 2 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 125 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 352 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 270 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 123 bp overlap
CTCF 3 datasets
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 163 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 114 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 66 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 93 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 300 bp overlap
ChIP BLaER1 ENCFF335XTP 98 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 131 bp overlap
ChIP SEM GSE117864.ERG.SEM 74 bp overlap
ESR1 7 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 118 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 154 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 88 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 175 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 108 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 108 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 184 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 296 bp overlap
FOXA1 2 datasets
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 119 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 53 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 173 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 352 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 196 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 161 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 153 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 352 bp overlap
KLF1 1 dataset
ChIP HEK293 GSE76494.KLF1.HEK293 93 bp overlap
KMT2A 7 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 154 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 138 bp overlap
ChIP ML-2_DMSO-D3 GSE127507.KMT2A.ML-2_DMSO-D3 352 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 300 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 352 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 352 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 352 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 311 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 300 bp overlap
MED1 4 datasets
ChIP CD4_Th1_DMSO GSE62482.MED1.CD4_Th1_DMSO 152 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 66 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 352 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 52 bp overlap
MEN1 5 datasets
ChIP ML-2_DMSO-180619 GSE127507.MEN1.ML-2_DMSO-180619 352 bp overlap
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 352 bp overlap
ChIP MOLM-13_compound10 GSE149183.MEN1.MOLM-13_compound10 192 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 352 bp overlap
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 352 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 333 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 127 bp overlap
MYB 3 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 266 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 170 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 129 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 331 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 133 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 352 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
POLR2A 4 datasets
ChIP esophagus squamous epithelium ENCFF708IOX 272 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 68 bp overlap
ChIP spleen ENCFF044PYR 223 bp overlap
ChIP spleen ENCFF446ZGT 132 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 187 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 186 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 139 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 347 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 282 bp overlap
PSIP1 1 dataset
ChIP ML-2 GSE95511.PSIP1.ML-2 352 bp overlap
RAD21 1 dataset
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 109 bp overlap
RELA 1 dataset
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 119 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 348 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 352 bp overlap
ChIP HEK293 ENCFF711QQB 243 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 189 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 226 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 211 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 260 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 253 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 58 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 149 bp overlap
STAT3 8 datasets
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 86 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 99 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 232 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 352 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 352 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 352 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 352 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 352 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 206 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 180 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 152 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 352 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 277 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 121 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 129 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 213 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 164 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 316 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 167 bp overlap