chr3 : 16,663,941 – 16,664,174

233 bp 72 TFs 1 linked gene

This 233 bp open chromatin element is linked to DAZL and is bound by 72 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
DAZL		6.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

72 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 226 bp overlap

ATF2 1 dataset

ChIP H1 ENCFF295GZO 108 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 119 bp overlap

BRD4 1 dataset

ChIP hESC GSE33281.BRD4.hESC 149 bp overlap

CHD1 2 datasets

ChIP H1 ENCFF128BID 75 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 73 bp overlap

CHD2 1 dataset

ChIP SK-N-SH ENCFF669KMB 137 bp overlap

CTCF 1 dataset

ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 141 bp overlap

CTCFL 1 dataset

Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap

EBF1 1 dataset

ChIP NALM-6 GSE126300.EBF1.NALM-6 145 bp overlap

ESR1 1 dataset

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 118 bp overlap

EZH2 2 datasets

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 233 bp overlap

ChIP LNCaP GSE39459.EZH2.LNCaP 233 bp overlap

FOSL1 1 dataset

ChIP BT-549 GSE112961.FOSL1.BT-549 123 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 65 bp overlap

JUND 2 datasets

ChIP H1 ENCFF010YXS 58 bp overlap

ChIP WA01 ENCSR000EBZ.JUND.WA01 56 bp overlap

KLF1 1 dataset

Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap

KLF11 2 datasets

Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap

KLF12 1 dataset

Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap

KLF14 1 dataset

Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap

KLF15 1 dataset

Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap

KLF16 2 datasets

Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap

KLF4 1 dataset

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 108 bp overlap

KLF5 1 dataset

Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap

KLF7 1 dataset

Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap

KLF9 1 dataset

Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap

MYOD1 1 dataset

ChIP myoblast GSE50413.MYOD1.myoblast 81 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 101 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 217 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 127 bp overlap

NIPBL 3 datasets

ChIP hESC GSE64758.NIPBL.hESC 70 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 87 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 54 bp overlap

NR3C1 1 dataset

ChIP NALM-6 GSE67046.NR3C1.NALM-6 107 bp overlap

PATZ1 1 dataset

Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 165 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 79 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 233 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 116 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 60 bp overlap

PRDM10 2 datasets

ChIP HEK293 ENCFF145WQQ 126 bp overlap

ChIP K-562 ENCSR120MPG.PRDM10.K-562 67 bp overlap

PRDM9 1 dataset

Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 81 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 233 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCFF518EXB 105 bp overlap

RELA 1 dataset

ChIP KB GSE52469.RELA.KB 100 bp overlap

RUNX1 1 dataset

ChIP NALM-6 GSE126300.RUNX1.NALM-6 135 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 212 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 147 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 158 bp overlap

SOX10 1 dataset

Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 98 bp overlap

SP1 3 datasets

Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap

ChIP WTC11 ENCFF688PEU 201 bp overlap

SP2 1 dataset

Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap

SP3 2 datasets

Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap

SP4 2 datasets

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SP8 1 dataset

Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap

SP9 1 dataset

Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap

Sox11 1 dataset

Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap

TBP 1 dataset

ChIP hESC_2h GSE122298.TBP.hESC_2h 159 bp overlap

TBX5 1 dataset

Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 61 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 165 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 55 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 210 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 129 bp overlap

ZFP14 1 dataset

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZNF135 1 dataset

Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap

ZNF148 1 dataset

Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap

ZNF184 1 dataset

Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap

ZNF263 1 dataset

Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap

ZNF281 2 datasets

Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap

ZNF410 1 dataset

Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap

ZNF460 1 dataset

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 214 bp overlap

ZNF547 1 dataset

Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap

ZNF675 1 dataset

Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap

ZNF684 1 dataset

Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap

ZNF701 1 dataset

Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap