chr2 : 231,355,486 231,356,354
868 bp 88 TFs 0 linked genes
This 868 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:231,350,486 – 231,361,354
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AR 3 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 181 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 368 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 314 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_24h DE_24h-ARNTHIF1A_MA0259.2 5 bp overlap
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
BRD4 8 datasets
ChIP BE2C GSE80151.BRD4.BE2C 336 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 392 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 57 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 336 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 691 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 202 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 542 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 356 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 197 bp overlap
CTCF 56 datasets
ChIP BE2C ENCFF757SRF 208 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 152 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
ChIP H9 ENCFF152GTF 287 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 146 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 131 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 169 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 68 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 432 bp overlap
ChIP ascending aorta ENCFF451CCT 247 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 377 bp overlap
ChIP body of pancreas ENCFF798MEO 189 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 221 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 168 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 214 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 171 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 156 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 254 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 319 bp overlap
ChIP endodermal cell ENCFF471YCZ 215 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 146 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 132 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 113 bp overlap
ChIP fibroblast of lung ENCFF084DUH 187 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 176 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 110 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 113 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 268 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 240 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 225 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 89 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 236 bp overlap
ChIP heart left ventricle ENCFF548XHH 259 bp overlap
ChIP heart left ventricle ENCFF842XRG 268 bp overlap
ChIP heart right ventricle ENCFF577TID 236 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 228 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 188 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 298 bp overlap
ChIP nerve_tibial ENCSR469POZ.CTCF.nerve_tibial 234 bp overlap
ChIP ovary ENCSR548DDS.CTCF.ovary 284 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 144 bp overlap
ChIP sigmoid-colon ENCSR857RJQ.CTCF.sigmoid-colon 148 bp overlap
ChIP thoracic aorta ENCFF012WJQ 173 bp overlap
ChIP thoracic aorta ENCFF012WJQ 78 bp overlap
ChIP thoracic aorta ENCFF166PKA 324 bp overlap
ChIP thoracic aorta ENCFF166PKA 116 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 301 bp overlap
ChIP tibial nerve ENCFF475AOE 284 bp overlap
ChIP tibial-nerve ENCSR793YAD.CTCF.tibial-nerve 191 bp overlap
ChIP tibial-nerve ENCSR875NEW.CTCF.tibial-nerve 121 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 277 bp overlap
ChIP uterus ENCFF466ZUR 189 bp overlap
ChIP uterus ENCFF837OEY 260 bp overlap
ChIP uterus ENCSR684PGO.CTCF.uterus 243 bp overlap
ChIP uterus ENCSR392SFJ.CTCF.uterus 160 bp overlap
CTCFL 2 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 251 bp overlap
EP300 1 dataset
ChIP sigmoid colon ENCFF953ZIP 261 bp overlap
EPAS1 2 datasets
Motif DE_12h DE_12h-EPAS1_MA2325.1 9 bp overlap
Motif DE_24h DE_24h-EPAS1_MA2325.1 9 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_24h DE_24h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 235 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 403 bp overlap
FLI1::FOXI1 3 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_24h DE_24h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
FOXO1::ELF1 3 datasets
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 322 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 209 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 160 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 181 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 601 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 538 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 827 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 619 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 308 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 232 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 219 bp overlap
HIF1A 2 datasets
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif DE_24h DE_24h-HIF1A_MA1106.2 6 bp overlap
HSF1 1 dataset
Motif DE_24h DE_24h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_24h DE_24h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_24h DE_24h-HSF4_MA0771.1 13 bp overlap
Hand1 2 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif DE_24h DE_24h-Hand1_MA2123.1 9 bp overlap
JUN 1 dataset
ChIP DE_D1 S13-DE-d1-JUN-exp1 282 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 164 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 360 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 451 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 650 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 165 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 232 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 360 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 119 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 130 bp overlap
Nfat5 3 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 320 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 91 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 448 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 471 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 423 bp overlap
PKNOX1 1 dataset
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF833NJP 162 bp overlap
ChIP K562 ENCFF262YXJ 151 bp overlap
ChIP sigmoid colon ENCFF754JQR 365 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 213 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 790 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 294 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 374 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 447 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 638 bp overlap
RBPJ 4 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 182 bp overlap
RELA 3 datasets
ChIP 786-O GSE86092.RELA.786-O 253 bp overlap
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
REST 1 dataset
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
RORA 1 dataset
Motif DE_24h DE_24h-RORA_MA0072.2 11 bp overlap
RREB1 3 datasets
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 403 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 261 bp overlap
SMAD2 5 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 543 bp overlap
SMAD2-3 5 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 833 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 868 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 868 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 244 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 868 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 851 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 868 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 868 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 731 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 284 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 374 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 264 bp overlap
SP1 3 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP5 5 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Smad4 1 dataset
Motif DE_24h DE_24h-Smad4_MA1153.2 7 bp overlap
Stat5b 3 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif DE_24h DE_24h-Stat5b_MA1625.2 9 bp overlap
Motif DE_24h DE_24h-Stat5b_MA1625.2 9 bp overlap
TBP 4 datasets
ChIP K-562 GSE55306.TBP.K-562 268 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 130 bp overlap
ChIP K562 ENCFF901UYM 197 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 80 bp overlap
TBX5 3 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_24h DE_24h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 506 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 286 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 531 bp overlap
TWIST1 4 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 170 bp overlap
ChIP BE2C GSE80151.TWIST1.BE2C 189 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 170 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 189 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 396 bp overlap
ZIC4 1 dataset
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 98 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap
ZNF449 4 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF610 3 datasets
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap
Motif DE_36h DE_36h-ZNF610_MA1713.2 10 bp overlap
ZNF682 2 datasets
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Motif DE_24h DE_24h-ZNF682_MA1599.2 11 bp overlap
ZNF707 1 dataset
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZSCAN29 2 datasets
Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap
Motif DE_24h DE_24h-ZSCAN29_MA1602.2 11 bp overlap
Zfp809 3 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Zic3 1 dataset
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap