chr2 : 206,480,048 – 206,480,478

430 bp 76 TFs 0 linked genes

This 430 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

76 transcription factors

AR 1 dataset

ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap

Ar 1 dataset

Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap

Atf3 1 dataset

Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap

BATF 1 dataset

Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap

BRD4 3 datasets

ChIP CHL-1 GSE95585.BRD4.CHL-1 288 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 379 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 295 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 289 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 430 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 168 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 153 bp overlap

ESR1 1 dataset

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 186 bp overlap

EZH2 1 dataset

ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 285 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FOS 1 dataset

Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap

FOSL1 1 dataset

Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 232 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 430 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 187 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

JUN 2 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 225 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 289 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

MAZ 1 dataset

ChIP HEK293 GSE76494.MAZ.HEK293 193 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 302 bp overlap

MYC 1 dataset

ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 62 bp overlap

MYOD1 1 dataset

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 148 bp overlap

MYOG 1 dataset

ChIP RH4 GSE83726.MYOG.RH4 206 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 299 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 60 bp overlap

NKX2-4 1 dataset

Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap

NR1D2 1 dataset

Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap

NR3C1 2 datasets

ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 183 bp overlap

ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 103 bp overlap

PATZ1 2 datasets

ChIP HEK293 ENCFF016MNJ 430 bp overlap

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 262 bp overlap

PAX6 1 dataset

Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap

PAX8 1 dataset

Motif DE_12h DE_12h-PAX8_MA2094.1 16 bp overlap

PCBP2 1 dataset

ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 215 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 310 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 210 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 185 bp overlap

RBPJ 1 dataset

ChIP MUTUL GSE75503.RBPJ.MUTUL 161 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 265 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 150 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 199 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SMARCA4 2 datasets

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 228 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 163 bp overlap

SMARCB1 1 dataset

ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 347 bp overlap

SMARCC1 1 dataset

ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 187 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 187 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 162 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 157 bp overlap

ZBTB26 1 dataset

Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap

ZBTB32 1 dataset

Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap

ZBTB40 1 dataset

ChIP K-562 ENCSR237VLT.ZBTB40.K-562 138 bp overlap

ZBTB44 2 datasets

ChIP HEK293 ENCFF560VPN 153 bp overlap

ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 226 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 213 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 306 bp overlap

ZNF143 1 dataset

Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 259 bp overlap

ZNF384 2 datasets

ChIP HEK293T ENCFF019DZX 242 bp overlap

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 189 bp overlap

ZNF398 2 datasets

ChIP HEK293 ENCFF184XEW 310 bp overlap

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 383 bp overlap

ZNF669 1 dataset

Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZSCAN21 1 dataset

Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap

ZSCAN5C 1 dataset

ChIP HEK293 ENCFF343DTU 310 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap