chr2 : 70,889,512 70,889,694
182 bp 57 TFs 1 linked gene
This 182 bp open chromatin element is linked to LINC01143 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01143 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:70,884,512 – 70,894,694
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 85 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 182 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 104 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 182 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 182 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 182 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 182 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 135 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 182 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 162 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 123 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 182 bp overlap
CTCF 12 datasets
ChIP H9 ENCFF152GTF 118 bp overlap
ChIP endodermal cell ENCFF471YCZ 153 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 182 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 150 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 133 bp overlap
ChIP neural progenitor cell ENCFF420RBO 182 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 182 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 98 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 182 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 139 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 182 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 92 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 182 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 133 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 174 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 164 bp overlap
ESR1 3 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 162 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 96 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 155 bp overlap
EZH2 23 datasets
ChIP GM12878 ENCFF635TDF 166 bp overlap
ChIP GM23248 ENCFF506FWX 182 bp overlap
ChIP GM23248 ENCFF506FWX 103 bp overlap
ChIP GM23338 ENCFF613YON 182 bp overlap
ChIP GM23338 ENCFF886DXX 182 bp overlap
ChIP H1 ENCFF232NZA 182 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 162 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 152 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 106 bp overlap
ChIP astrocyte ENCFF365JTP 182 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 182 bp overlap
ChIP fibroblast of lung ENCFF479BAW 167 bp overlap
ChIP hESC GSE113817.EZH2.hESC 156 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 170 bp overlap
ChIP hepatocyte ENCFF118DKH 98 bp overlap
ChIP hepatocyte ENCFF552DZB 182 bp overlap
ChIP hepatocyte ENCFF552DZB 182 bp overlap
ChIP keratinocyte ENCFF070STK 182 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 55 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 182 bp overlap
ChIP neural cell ENCFF610EPB 96 bp overlap
ChIP neural progenitor cell ENCFF018MKA 182 bp overlap
ChIP neural progenitor cell ENCFF472NFV 182 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 182 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 182 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 73 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 53 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 182 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 138 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 182 bp overlap
HNRNPLL 1 dataset
ChIP HepG2 ENCFF355PIC 67 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 182 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 163 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 182 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 162 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 130 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 150 bp overlap
MEF2D 1 dataset
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 51 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 182 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 182 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 182 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 182 bp overlap
PCGF2 2 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 57 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 182 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 152 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 182 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 182 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 182 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 72 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 175 bp overlap
RBM39 2 datasets
ChIP HepG2 ENCFF084YZE 138 bp overlap
ChIP HepG2 ENCFF801JUH 136 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 182 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 182 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 77 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 178 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 62 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 87 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 182 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 182 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 144 bp overlap
SUZ12 8 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 169 bp overlap
ChIP GM12878 ENCFF498QAM 164 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 170 bp overlap
ChIP H1 ENCFF507HGF 182 bp overlap
ChIP H1 ENCFF881NFR 182 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 182 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 182 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 182 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 182 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 182 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 132 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 113 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 128 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 150 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 182 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 60 bp overlap
ZNF263 1 dataset
ChIP HepG2 ENCFF626SSV 53 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 182 bp overlap