chr20 : 2,701,838 2,702,067
229 bp 47 TFs 1 linked gene
This 229 bp open chromatin element is linked to EBF4 and is bound by 47 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
EBF4 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,696,838 – 2,707,067
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 229 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 158 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 215 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 229 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 229 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 229 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 202 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 90 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 229 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 166 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 229 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 229 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 112 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 198 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 116 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 72 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 126 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 228 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 191 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 229 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 229 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 229 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 229 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 229 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 229 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 137 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 226 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 229 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 175 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 229 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 180 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 229 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 97 bp overlap
MED26 1 dataset
ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 179 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 229 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 183 bp overlap
ChIP H1 ENCFF747ZPQ 229 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 229 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 229 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 229 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 229 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 155 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 229 bp overlap
POU5F1 7 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 229 bp overlap
ChIP H1 ENCFF698ZAP 176 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 229 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 229 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 229 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 200 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 229 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 180 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 145 bp overlap
RNF2 3 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 229 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 229 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 195 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 186 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 153 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 218 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 229 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 229 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 229 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 171 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 223 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 155 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 148 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 229 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 184 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 229 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 229 bp overlap
SUZ12 2 datasets
ChIP hiPSC GSE124903.SUZ12.hiPSC 229 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 229 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 174 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 212 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 171 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 229 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 229 bp overlap
YY1 2 datasets
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 55 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 136 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 151 bp overlap