chr2 : 6,986,376 6,986,652
276 bp 66 TFs 0 linked genes
This 276 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:6,981,376 – 6,991,652
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 7 datasets
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 224 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 171 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 268 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 276 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 138 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 164 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 184 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 202 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 221 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 160 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 141 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 96 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 111 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 132 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 177 bp overlap
BRD4 16 datasets
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 119 bp overlap
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 223 bp overlap
ChIP K-562 GSE140325.BRD4.K-562 96 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 94 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 251 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 128 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 130 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 137 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 196 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 96 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 187 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 152 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 276 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 76 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 257 bp overlap
CDK9 1 dataset
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 178 bp overlap
CEBPA 6 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 140 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 109 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 92 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 76 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 74 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 97 bp overlap
CEBPB 3 datasets
ChIP K562 ENCFF194QGF 59 bp overlap
ChIP K562 ENCFF584CTB 82 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 65 bp overlap
CEBPG 3 datasets
ChIP K-562 ENCSR490LWA.CEBPG.K-562 135 bp overlap
ChIP K562 ENCFF651CMK 83 bp overlap
ChIP K562 ENCFF783ADE 178 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 264 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 276 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 89 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 273 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 276 bp overlap
CTCF 15 datasets
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 188 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 158 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 153 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 218 bp overlap
ChIP body of pancreas ENCFF438KTE 276 bp overlap
ChIP body of pancreas ENCFF798MEO 271 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 107 bp overlap
ChIP islet ERP004003.CTCF.islet 183 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 198 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 195 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 243 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 155 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 147 bp overlap
ChIP prostate gland ENCFF979KAF 215 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 145 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF364PUR 148 bp overlap
ChIP BLaER1 ENCFF460KDD 134 bp overlap
ChIP BLaER1 ENCFF896HSY 58 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 77 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 142 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 276 bp overlap
ESR1 7 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 172 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 211 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 175 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 226 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 186 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 193 bp overlap
FOXA1 3 datasets
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 210 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 175 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 276 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 276 bp overlap
GATA1 3 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 128 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 120 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 106 bp overlap
GATA2 6 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 270 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 132 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 139 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 105 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 110 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 98 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 108 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 209 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 156 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 233 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 261 bp overlap
ChIP K562 ENCFF055GAZ 276 bp overlap
ChIP K562 ENCFF317JJX 276 bp overlap
ChIP K562 ENCFF317JJX 223 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 84 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 178 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 129 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 52 bp overlap
NOTCH1 1 dataset
ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 77 bp overlap
NR3C1 6 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 238 bp overlap
ChIP A-549 ENCSR000BHF.NR3C1.A-549 217 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 173 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 75 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 195 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 276 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 52 bp overlap
PGR 6 datasets
ChIP T-47D GSE31129.PGR.T-47D 161 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 243 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 134 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 274 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 244 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 149 bp overlap
POLR2A 1 dataset
ChIP body of pancreas ENCFF727UBE 276 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 217 bp overlap
RAD21 3 datasets
ChIP K562 ENCFF634XYR 276 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 276 bp overlap
ChIP neural cell ENCFF564MOT 276 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 207 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 276 bp overlap
REST 2 datasets
ChIP neural cell ENCFF882LXX 276 bp overlap
ChIP neural cell ENCFF882LXX 183 bp overlap
RFX1 10 datasets
ChIP HepG2 ENCFF144SCF 242 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 252 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 276 bp overlap
ChIP K562 ENCFF421AVO 276 bp overlap
ChIP K562 ENCFF809XVG 232 bp overlap
ChIP MCF-7 ENCFF782EZS 96 bp overlap
ChIP MCF-7 ENCFF782EZS 276 bp overlap
ChIP MCF-7 ENCFF973QAD 157 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 247 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 213 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 86 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 55 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 62 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 190 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 147 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 155 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 276 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 276 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE67282.SOX2.hiPSC 276 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 131 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 132 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 140 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 84 bp overlap
TP63 2 datasets
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 181 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 268 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 276 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 276 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 115 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 105 bp overlap
ZBTB16 1 dataset
ChIP KG-1_shEZH2 GSE109619.ZBTB16.KG-1_shEZH2 54 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 225 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 202 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 162 bp overlap