chr18 : 42,780,060 42,780,826
766 bp 77 TFs 0 linked genes
This 766 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:42,775,060 – 42,785,826
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
Atf3 2 datasets
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BATF 2 datasets
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 2 datasets
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 2 datasets
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_24h DE_24h-BATFJUN_MA0462.3 7 bp overlap
BNC2 2 datasets
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 228 bp overlap
ESRRA 2 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif DE_24h DE_24h-ESRRA_MA0592.4 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 255 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 250 bp overlap
HSF2 2 datasets
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
Motif DE_24h DE_24h-HSF2_MA0770.1 13 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 285 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 411 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 477 bp overlap
Jun 2 datasets
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
Motif DE_24h DE_24h-MEIS2_MA0774.1 8 bp overlap
MEIS3 2 datasets
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
Motif DE_24h DE_24h-MEIS3_MA0775.2 7 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 129 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 452 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nr5A2 2 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_24h DE_24h-Nr5A2_MA0505.3 9 bp overlap
PAX6 1 dataset
Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap
PAX9 1 dataset
Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 2 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 266 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 653 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 657 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 550 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 645 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 548 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 288 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 249 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB26 2 datasets
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_24h DE_24h-ZBTB26_MA1579.2 8 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 200 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF652 2 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Motif DE_24h DE_24h-ZNF652_MA1657.2 9 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap